| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1663 |
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| Symbol | |
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| ID | 5670065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1987870 |
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| End bp | 1988745 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641240581 |
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| Product | shikimate dehydrogenase substrate binding subunit |
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| Protein accession | YP_001506007 |
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| Protein GI | 158313499 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.486216 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCA TGGCGCGGGG GTCGGTGACG CTGGCCGCCC CGGATCCGGA TCTGCGGGAG
CCTGCGCGGC CGCGGGAGAT CACCGGGACG ACCCGGCTGT ACGCCGTCGT CGGTGACCCG
GTCGAGCAGG TCCAGGCGCC GATGCTGGTG AACCCGGTGT TCGCCGAGGC GGGCCTGGAC
GCCGTCCTGG TGCCCGCGCA CGCGCGCCCG CGTGACTTCC CGACGGTGCT GGCCGGGCTG
TGTGCCATGG CCAACCTGGA CGGCATCCTG ATCACGATCC CGCACAAGGT CGCAGCTGCG
GAGCTGGCGG ACGTCCGCTC CGCCGCGGCG CGGATAAGCG GCAGCGCGAA TGCCCTGCGG
CGCGAGCCGG ACGGGCGGTG GCTGGCCGAC AACTTCGACG GCGCCGGCTT CGTCCGCGGC
CTGGCCCGCG CGGGGCATCG TGTGGCGGGG GCCCGGGTCC ACCTGGCCGG TGCGGGCGGG
GCCGGCAGCG CGATCGCGGT GGCGCTGCTC GAGGCCGGCT GCGCGAGCCT GGCCCTCCAC
GATCCCGACA CCGCCCGTTC GGGCGAACTG CTGGGACGGC TGGACGCGCA CTGGCCCGGT
CGGGCTGGTC CGGCGGCGGC GCCCACGCCG GCCGGGCAGG TCGATCTGAT CGTGAACGCC
ACGCCGCTCG GGCTGCGCCC GGCCGACCCG TTGCCGTTCG ACCCCGCGAT GCTGCCGGCG
GGCTGCGTCG TGGCGGACAT CATCATGAAG CCGGCGCGCA CCCGGCTGCT GCAGGCGGCG
GCCGAGCGCG GTCTGCCCGC CCATCCGGGC ATCCACATGC TGGCCGAACA GGTCGACCTG
TACCGCACCT TCTTCGGCCT GCCGGGCGCG CGGTGA
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| Protein sequence | MTSMARGSVT LAAPDPDLRE PARPREITGT TRLYAVVGDP VEQVQAPMLV NPVFAEAGLD
AVLVPAHARP RDFPTVLAGL CAMANLDGIL ITIPHKVAAA ELADVRSAAA RISGSANALR
REPDGRWLAD NFDGAGFVRG LARAGHRVAG ARVHLAGAGG AGSAIAVALL EAGCASLALH
DPDTARSGEL LGRLDAHWPG RAGPAAAPTP AGQVDLIVNA TPLGLRPADP LPFDPAMLPA
GCVVADIIMK PARTRLLQAA AERGLPAHPG IHMLAEQVDL YRTFFGLPGA R
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