| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1629 |
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| Symbol | |
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| ID | 5670031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1945448 |
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| End bp | 1946350 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641240547 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001505973 |
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| Protein GI | 158313465 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.597249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.987085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTCG AGCCCGCGTC CCCCGCGAAC GGCGCCGCCT GGTACGCCGA ACAGTTCGAA
CGCCAACGTC GCCAGCTGCG CGCCGTCGCC TACCGCATGC TCGGCTCCTT CGCGGACGCC
GACGACGCAG TGCAGGAAGC CTGGCTGCGG CTCAGCCGAG CAGACGAGAC GGCGATCGAC
AACCTGGCCG GGTGGCTGAC CACCGTCGTC GGGCGCGTCT GCGTCGACAT GCTGCGCGCC
CGCCGGGCGC GGCGCGAGGA CCTGCCCGGC ACGTGGCTGC CCGACCCGGT CATCACCGAG
GCAGACACCC CCGATCCCGA ACAACGCGTC CTGCTGGCCG ACTCGGTCGG CCTGGCGCTC
CTCGTCGTCC TGGACAACCT TCGACCGGCG GAACGGCTCG CGTTCGTGCT GCACGACATG
TTCGGCGTCC CGTTCGACGA CATCGCTCCC ATCCTCGAGA AGAGTCCGGC GGCGACACGG
CAGCTGGCCA GTCGCGCCCG TCGTCGTGTC CAGGGCAGCG GCACCCGGCC GGATCCCGAC
CTCCCCACCC AACGTCGCGT GGCCGAAGCC TTCCTCGCCG CCGCTCGCAA CGGTGATTTC
GCCGCGCTCG TCGAACTCCT CGACCCGGAC GTCAGACTCC GGGTCGACAC CGGGCCCCGC
ACCTGGCTCG CCCCACCACT GCTCACCGGA GCACGCGACG TCGCCAGCCA CGCCGCCGCC
CAGGGCCCAC GCTTCGCCGG CCCCTGGGAA CCCGCCCTCG TCAACGGCGC CGCCGGCATG
ATCGCGCGTG GCAGAGCCGG GCTGATCGCA GTCGTGGGAT TCATCGTCGT CAACGGCCGC
ATCAGCGAGA TCGACCTCAT TCTCGACCCC GACAGGCTGG CCGCCGTGAA AGTCAACGAC
TGA
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| Protein sequence | MTFEPASPAN GAAWYAEQFE RQRRQLRAVA YRMLGSFADA DDAVQEAWLR LSRADETAID
NLAGWLTTVV GRVCVDMLRA RRARREDLPG TWLPDPVITE ADTPDPEQRV LLADSVGLAL
LVVLDNLRPA ERLAFVLHDM FGVPFDDIAP ILEKSPAATR QLASRARRRV QGSGTRPDPD
LPTQRRVAEA FLAAARNGDF AALVELLDPD VRLRVDTGPR TWLAPPLLTG ARDVASHAAA
QGPRFAGPWE PALVNGAAGM IARGRAGLIA VVGFIVVNGR ISEIDLILDP DRLAAVKVND
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