| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1619 |
|---|
| Symbol | |
|---|
| ID | 5670022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 1936741 |
|---|
| End bp | 1937475 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641240538 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_001505964 |
|---|
| Protein GI | 158313456 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCATGAGC GCATAGCGGA CCTCGCCGAC CCCGGGCCGG CGGACACGCT GGTCGACCTG
GGCGCCGGCC ACGGCGACAC CCTCGCCGCG ATCACCCGCC GGTCCCCCTT GGCGCGGCTG
ATCGGGCTCG ACCTGAACCC CGAGCCACTG CGCCGTCTCA CCGACGCGCT GCCCGGAGCA
GGGGCCGTCC AGCATGATCT GAGCGGGCCG CTGCCGTTCG CCGACGGGCG CGTCGACATC
GTGATCTCCA ACAACACGTT CGAGTGCCTC ACCGATCCGG CGGCGCTGCT GGAGGAGATC
GCCCGCGTCC TGCGGCCGAG TGGGCGGGCG GTGCTCGGCC ACACCGACTT CGAGACGATC
GCCATCGCGA TCGCGGACCG CGACCTGGCC CGCCGGGTGC TACTCACCTA CGCGGAGCTG
CCGGTCCCCT ACGAGTACAT GGCGGCCACC GACCCGCAGC TGGGACGTCG CCTCGCGGGC
CTGGTGCGAC GCAGCCCGCT GGCGCTCGAG TCCGTCGAGG CGCACACGAC CGTCTCGCCG
ACGCTCGCGG AGGCCATGCC GCTCCGGCTG GGCGAGATCC ACGACGCCGT CCACCGCTGC
GCGGACCGCG GTTTGGGCCA CGTGAGCCTG GACGAGCTCG CGGAGTGGAG CCGCCAGCTC
CGGGCGGCTC AGGACGACGG CGACTTCCTG TTCAGTGAGA CCGCGTACAT CGTCACCGCC
CGCCGGGCCG GGTGA
|
|---|
| Protein sequence | MHERIADLAD PGPADTLVDL GAGHGDTLAA ITRRSPLARL IGLDLNPEPL RRLTDALPGA
GAVQHDLSGP LPFADGRVDI VISNNTFECL TDPAALLEEI ARVLRPSGRA VLGHTDFETI
AIAIADRDLA RRVLLTYAEL PVPYEYMAAT DPQLGRRLAG LVRRSPLALE SVEAHTTVSP
TLAEAMPLRL GEIHDAVHRC ADRGLGHVSL DELAEWSRQL RAAQDDGDFL FSETAYIVTA
RRAG
|
|---|
| |