Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1613 |
Symbol | |
ID | 5670016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1930459 |
End bp | 1931913 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 641240532 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001505958 |
Protein GI | 158313450 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00723596 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGACC CCGGGAGCCG CCCGAACCCG CGGAATCGGC GGCCCGCCGG GCTGGCGGTG CGGATCGCCC TGGCGACGAC CGCCGTCGCC GCGCTCGCGG TCCTGCTCAC CGGCACGATC TTCGCCGGTC TCGTCGGCGG AGCCGCGGAC GACGAGGCCC GCCGCGCGCT CGGCCGGCAG GCGGATGTCG TCGTCGCGCT CTACGACCGT CCCAACGCGA CCGCCGACCT GCGCGCCGGG GTGACCAGGA CGATCGCCGC CCAGCGGGTG ACCTTCGTCC GGGTCGCCCC GGACGGCCGT CCGACCGCGC GCCAGGGGCC CGGTGGCGGC AGGGGCCTCG AGCTCCCGGC CGACGTCCTC GCCCGGGTCG CCGCCGGTGC GGAGGTCGGC ACGGCCCGCA CCGTCGGCGG CCGGCGGGTG ATCGTCGTCG GCCGGCCGCT CGCCCACGGC GGCGCGATCG CGCTCGTGCA ACCGGCGTCC GAGAGTCGTC AGCTCGCCGG CGCCGTCCTG CGGCGGCTCG GGATCGCGCT GGTGTGCGGC CTTGCCGCCG CTACCGTTGC CGGCGCCGTC CTGGCGCGCC GGCTCGCCCG CCCGCTGCGG CGCCTCGCCG ACGCCGCCCA CCAGCTCGCC GCGGGCCGGC GCGACATCCG TGTCGGCACC GGCGGTCCGC GCGGCCCGGC CGAGGTGGCG GACGTCGGCG CCGCCCTCGA CGGCCTCGCC GCGGCTCTCG CCGTCAGCGA GGACCGGCAG CGCAGGTTCC TGCTGTCCGT CTCGCACGAG CTGCGCACCC CGCTGACGGC CGTCCAGGGT TTCGCCGAGG CGCTCGCGGA CGGCGTGACC GAGCCGGCCG ACACCGCCGG CACCGGTCGG ATCATCCTCG GGGAGGCCCG CCGTCTCGAC CGGCTCGTCA CCGACCTGCT CGACCTCGCC CGGCTCGGCG CGGACGACTT CCGGGTCGAC CTCGCGCCCG TGGACCTGGG CGCTCTGGTG GCCGGGGCGG TGGAGGTCTG GCGGCCGCGG TGCACGGCGG CCGGCGTCGA GCTGCGGGTC GAGCTGCCGG ACGGGCCGGT GCCGGTGGTC ACCGACCCGG TCCGCTTCCG GCAGATCGTC GACGGACTGG CCGAGAACGC GCTGCGGGTG GTCCCGGCCG GCGCGCCGAT CGTGATGGCG CTGGGCGGCG GTCCCCAGGG GGCAGTGGTC CCTCAGGGGG TGGTGGTCCC CCCGGAGGCG GTGTTCGAGG TGCGGGACGG CGGTCCCGGC CTCACCGCCG ACGACCTCGC CGTGGCCTTC GACCGCTCGG CGCTGTTCGA GCGCTACCGG GGCCGCCGGC CCGTCTCGAC CGGCGTCGGG CTGGCGCTCG TCGCCGGGCT GGCCCGCCGC CTCGGCGGTG AGCCGTTCGC CGGGCACGCC CCCGAAGGCG GCGCCGTCTT CGGTATCCGG CTGCCGCCCG GCTGA
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Protein sequence | MPDPGSRPNP RNRRPAGLAV RIALATTAVA ALAVLLTGTI FAGLVGGAAD DEARRALGRQ ADVVVALYDR PNATADLRAG VTRTIAAQRV TFVRVAPDGR PTARQGPGGG RGLELPADVL ARVAAGAEVG TARTVGGRRV IVVGRPLAHG GAIALVQPAS ESRQLAGAVL RRLGIALVCG LAAATVAGAV LARRLARPLR RLADAAHQLA AGRRDIRVGT GGPRGPAEVA DVGAALDGLA AALAVSEDRQ RRFLLSVSHE LRTPLTAVQG FAEALADGVT EPADTAGTGR IILGEARRLD RLVTDLLDLA RLGADDFRVD LAPVDLGALV AGAVEVWRPR CTAAGVELRV ELPDGPVPVV TDPVRFRQIV DGLAENALRV VPAGAPIVMA LGGGPQGAVV PQGVVVPPEA VFEVRDGGPG LTADDLAVAF DRSALFERYR GRRPVSTGVG LALVAGLARR LGGEPFAGHA PEGGAVFGIR LPPG
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