| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1596 |
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| Symbol | |
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| ID | 5669999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1907271 |
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| End bp | 1908248 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641240515 |
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| Product | transketolase central region |
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| Protein accession | YP_001505941 |
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| Protein GI | 158313433 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0994447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCAGG CGCTCAACGC CGCGCTGCGC GACTCGCTGC GGGCGGATCC CGACGTCCAC
GTGCTCGGTG AGGACGTCGG TGCGCTCGGC GGCGTGTTCC GGGTCACCGA CGGCCTCGCC
GCCGAGTTCG GGACGCAGCG CTGCCTGGAC ACCCCGCTGG CCGAGGCGGG CATCCTCGGC
ACCGCGGTGG GCATGGCGAT GTACGGGCTG CGGCCCGTCG TCGAGATGCA GTTCGACGCC
TTCGCGTACC CGGCGTTCGA GCAGCTCGCG TCGCACGTGG CGAAGATGCG CAACCGCACC
GGCGGGGCGG TGTCGCTGCC GGTGACGATC CGTGTCCCGT ACGGCGGGGG CATCGGCGGC
GTGGAGCATC ACAGCGACTC CAGCGAGGCG TACTACGCGC ACACCCCCGG GCTGCACGTG
GTCACCCCCG CCACCGTCAC CGACAGCTAC GGTCTGCTGC GCGCCGCGAT CGCGTCGGAC
GACCCGGTCG TCTTCCTGGA GCCCAAGCGG CTCTACTGGT CCACCGAGGA CGGGCTCTCC
CCCGCAGAGG TCGCCCGCGC CGAGGTCGGG CCGATCGGAC GGGCGGCCGT CCGCCGGCCC
GGCACCTCGG CGACGCTGCT GACCTACGGC CCGGCGCTGC CGGTGTGCCT GCGGGCCGCC
GAGGCCGCGG TCGCGGAGGG CTGGGACCTG GCGGTCGTCG ACCTGCGCTC GCTGGTGCCC
TTCGACGACG AGACGGTCTG CGCGGCGGTC CGGGCCACCG GGCGCGCGGT CGTGGTGCAC
GAGGCCGCGG GTTTCGGCGG CGTCGGCGCG GAGATCGCCG CCCGGGTCAC CGAACGGTGC
TTCCACCACC TGGCCGCCCC GGTGCTGCGG GTCACCGGGT TCGACATCCC GTACCCGCCG
CCGATGCTCG AGCATCACTA CCTTCCCAGC GTCGACCGCG TCCTCGACGC CGTCGCCCGA
CTCCAGTGGG AGCAGTGA
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| Protein sequence | MVQALNAALR DSLRADPDVH VLGEDVGALG GVFRVTDGLA AEFGTQRCLD TPLAEAGILG
TAVGMAMYGL RPVVEMQFDA FAYPAFEQLA SHVAKMRNRT GGAVSLPVTI RVPYGGGIGG
VEHHSDSSEA YYAHTPGLHV VTPATVTDSY GLLRAAIASD DPVVFLEPKR LYWSTEDGLS
PAEVARAEVG PIGRAAVRRP GTSATLLTYG PALPVCLRAA EAAVAEGWDL AVVDLRSLVP
FDDETVCAAV RATGRAVVVH EAAGFGGVGA EIAARVTERC FHHLAAPVLR VTGFDIPYPP
PMLEHHYLPS VDRVLDAVAR LQWEQ
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