| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1589 |
|---|
| Symbol | |
|---|
| ID | 5669992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 1899096 |
|---|
| End bp | 1899605 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641240508 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001505934 |
|---|
| Protein GI | 158313426 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0850023 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.119457 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACGT GGCCGAGAGC TAACGTGACT CACATGTCCA GGCCGGCCGC CGCGCAGACC
ACCCCGGCGC TGTTGCAGGC CGTGGCCCGG TCGCAGGCGT CCCGGGTGGC CGCCGGGTTC
ACCGAGGCCG GGCTCACCGG GCTGCGCCCG GGTCACGCGC AGTTGCTGAT CCCCCTGCTG
AGCGGTGGAC AGCGGGTCTC CGAGCTGGCG GAGCAGCTCG GCGTCTCCCG ACAGGCCGTG
GCTCAGGTGG TTACCACGCT CGAGAAGGGC AGCTACGTCG AGCGGGTGGC CGATCCGCGC
GACGGGCGGG CCCGCGTCGT CCGACTGACG GCGCTCGGCC TGGTGGCGAT GCGGGCGATG
CGCGCCACCG CGCTGGCCGT GGAGCGGGAG TGGGCCGCCC GGCTCGGCGC CGACGGCCTC
GGCCAGCTTC GCGACCTGCT CACCACCCTG CTCGACACCG ACACCGACAC CGACACCGGT
GCGGGCGCGG GTTCCGACAC CAGCGCCTGA
|
|---|
| Protein sequence | MSTWPRANVT HMSRPAAAQT TPALLQAVAR SQASRVAAGF TEAGLTGLRP GHAQLLIPLL
SGGQRVSELA EQLGVSRQAV AQVVTTLEKG SYVERVADPR DGRARVVRLT ALGLVAMRAM
RATALAVERE WAARLGADGL GQLRDLLTTL LDTDTDTDTG AGAGSDTSA
|
|---|
| |