| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1582 |
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| Symbol | |
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| ID | 5669985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1889912 |
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| End bp | 1890811 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 641240501 |
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| Product | pentapeptide repeat-containing protein |
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| Protein accession | YP_001505927 |
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| Protein GI | 158313419 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1357] Uncharacterized low-complexity proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00696223 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGGTGCTG AGCGCCGGGA CCTGCACACC CGGCCGCTGA CCACCCCGGG TACCAACGAC
CCGGCGCCGG ATCAGGCTGC GCCCGTTCAC ACGGCGACCG GTCGCACGGC GCCGGGTGAC
ACGGCGCCGG GCGCCGCCTC CCGTGGCGGC GCCCCCGCCC GGTTGTCCTC GCTGGGTGAC
CTGCTCGCCG CGCTCCGCGG GAGACCGCGG ACCGGCGGGT ACGCCGCCGG CGCAGACCTG
ACCGGCGCGG ACCTGGCCGG GGTGTGCCTC ACCGGGCGGA TCCTGCGCGG GGCGCAGCTG
CACGGTGCCT ACCTCAGCGG CGCCGACCTG CGCGGGACGG ACCTCCGGGA CGCCTGCCTG
CGCGGGGCCG ACCTGCGGGA CGCCGACCTC AGCCAGGCCG CGCTCGGCGG TGCGGACCTC
GCCGGCGCGC TGCTCGCCGG CGCCTTCCTC ACCGGCGCCG ACCTGCACGG GACGGACCTA
CACGGAGCCT TCCTCCACAA CGCGGATCTC CGGAAGGCCT TTCTCGCCCG CGCCGACCTG
CGCGGAGCCG ACGCCGACGG GATCATCATG CGCGGCGCGG ACCTGCGCGC GGCCGACGCC
ACCGACGCGG TCCTGCGTCA GGCGGACCTG CGTGCGGCCG ACCTGCGCGG GATCCGCCTG
GCCGGGGCGA TCCTGCGCGG GGTCGACCTG CGCGGGGCGG ACCTGCGCGC CGCGGACCTG
GGCACCGCCC TCCTGAGCTC CGCCCGGCTC GACCGGGTGT ACTGGTCGAC CGCGACGACC
TGGCCGCCCG GTGAGTGGAC CTACCGGATG CGGTCGGCGT CCCAGCAGGT CGCCCCGGGC
GTCTTCCAGG TCTCCGACGA GCCGACGCGC CCCGGCCGCC ATCGCCCGAC GCCCGACTGA
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| Protein sequence | MGAERRDLHT RPLTTPGTND PAPDQAAPVH TATGRTAPGD TAPGAASRGG APARLSSLGD
LLAALRGRPR TGGYAAGADL TGADLAGVCL TGRILRGAQL HGAYLSGADL RGTDLRDACL
RGADLRDADL SQAALGGADL AGALLAGAFL TGADLHGTDL HGAFLHNADL RKAFLARADL
RGADADGIIM RGADLRAADA TDAVLRQADL RAADLRGIRL AGAILRGVDL RGADLRAADL
GTALLSSARL DRVYWSTATT WPPGEWTYRM RSASQQVAPG VFQVSDEPTR PGRHRPTPD
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