Gene Franean1_1581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1581 
Symbol 
ID5669984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1889020 
End bp1889853 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content72% 
IMG OID641240500 
Producthypothetical protein 
Protein accessionYP_001505926 
Protein GI158313418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.76321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00696223 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCGCAGGC CCTGGAGTTC GCGCTTCGCC GACTCGCCGA CTCGCCGACC CTGCCGACTT 
GACCGACTAC GCCTGCGCGG GCAACGCCAG GTCCGGGGGC CGCGTGTTAT CTCGGTCGGC
GGGCGCCGGG GCCTCTGCGA CCATGAACGG GTGGACGAGC TTGAGGAAGC GTGGTTTGCG
CTGGAGGCGG GCGACAAGAT CGAGGTGAGC CTGCCGCACC TCGCGGCGGA CGCGCTGGCG
GCCGGGTTCG ACAGCCCCGC GCTGCGTGAG CTGGCCGCCC TCGGAGTCCG GGACGATCTC
GAAGCGCGCC GCCTGCTGCC CGTCGCGCTC ACCGAGTTGG GCCACAGCCT CGAGCCGCAG
ACAGATGCGT GGGGTGAGCT GTTTCCCTGG GAGGAGTCGC GCGCCCGGTT CGATCCCGAT
CTCGTGGCTC GGACCGAGCA GGCCCTGGCG ATCGTGCAGC GGGACCTGGA CGGGACCGAC
ACCGGCCTGG GCCGCCTGAC GCTCCACTGG TCCGGCGGAT ACGGCGACGA CGGTGAGCCG
CAGCTCCTCG TCGGCTTCGG CGGCGAGCCC TACCGCGGCG GGGGCAACCC CGCGGACTGC
CTGGGCGGTG TGGACCTGCC CCACAGGGTC GTGTCGCTCG CCGCGAACGT CCAGGAGTGC
GTGATGGAGA TGTTCCAGTT CTACTGGCCG ACCTGCGCCC GTCATCGCCG CGGCCTGCAT
CTGCAGGACT GGGACTGGGA GGGCATCGGA TGGCCGGTGT GGCGGTGCCG GGCCGAGCGA
GGCCACGCCG TCGCCCCACT CGGAGGGCTG CGGACGGAAC CGCCGATCTC CTGA
 
Protein sequence
MRRPWSSRFA DSPTRRPCRL DRLRLRGQRQ VRGPRVISVG GRRGLCDHER VDELEEAWFA 
LEAGDKIEVS LPHLAADALA AGFDSPALRE LAALGVRDDL EARRLLPVAL TELGHSLEPQ
TDAWGELFPW EESRARFDPD LVARTEQALA IVQRDLDGTD TGLGRLTLHW SGGYGDDGEP
QLLVGFGGEP YRGGGNPADC LGGVDLPHRV VSLAANVQEC VMEMFQFYWP TCARHRRGLH
LQDWDWEGIG WPVWRCRAER GHAVAPLGGL RTEPPIS