Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1581 |
Symbol | |
ID | 5669984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1889020 |
End bp | 1889853 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641240500 |
Product | hypothetical protein |
Protein accession | YP_001505926 |
Protein GI | 158313418 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.76321 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00696223 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGCGCAGGC CCTGGAGTTC GCGCTTCGCC GACTCGCCGA CTCGCCGACC CTGCCGACTT GACCGACTAC GCCTGCGCGG GCAACGCCAG GTCCGGGGGC CGCGTGTTAT CTCGGTCGGC GGGCGCCGGG GCCTCTGCGA CCATGAACGG GTGGACGAGC TTGAGGAAGC GTGGTTTGCG CTGGAGGCGG GCGACAAGAT CGAGGTGAGC CTGCCGCACC TCGCGGCGGA CGCGCTGGCG GCCGGGTTCG ACAGCCCCGC GCTGCGTGAG CTGGCCGCCC TCGGAGTCCG GGACGATCTC GAAGCGCGCC GCCTGCTGCC CGTCGCGCTC ACCGAGTTGG GCCACAGCCT CGAGCCGCAG ACAGATGCGT GGGGTGAGCT GTTTCCCTGG GAGGAGTCGC GCGCCCGGTT CGATCCCGAT CTCGTGGCTC GGACCGAGCA GGCCCTGGCG ATCGTGCAGC GGGACCTGGA CGGGACCGAC ACCGGCCTGG GCCGCCTGAC GCTCCACTGG TCCGGCGGAT ACGGCGACGA CGGTGAGCCG CAGCTCCTCG TCGGCTTCGG CGGCGAGCCC TACCGCGGCG GGGGCAACCC CGCGGACTGC CTGGGCGGTG TGGACCTGCC CCACAGGGTC GTGTCGCTCG CCGCGAACGT CCAGGAGTGC GTGATGGAGA TGTTCCAGTT CTACTGGCCG ACCTGCGCCC GTCATCGCCG CGGCCTGCAT CTGCAGGACT GGGACTGGGA GGGCATCGGA TGGCCGGTGT GGCGGTGCCG GGCCGAGCGA GGCCACGCCG TCGCCCCACT CGGAGGGCTG CGGACGGAAC CGCCGATCTC CTGA
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Protein sequence | MRRPWSSRFA DSPTRRPCRL DRLRLRGQRQ VRGPRVISVG GRRGLCDHER VDELEEAWFA LEAGDKIEVS LPHLAADALA AGFDSPALRE LAALGVRDDL EARRLLPVAL TELGHSLEPQ TDAWGELFPW EESRARFDPD LVARTEQALA IVQRDLDGTD TGLGRLTLHW SGGYGDDGEP QLLVGFGGEP YRGGGNPADC LGGVDLPHRV VSLAANVQEC VMEMFQFYWP TCARHRRGLH LQDWDWEGIG WPVWRCRAER GHAVAPLGGL RTEPPIS
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