| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1575 |
|---|
| Symbol | |
|---|
| ID | 5669978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 1880438 |
|---|
| End bp | 1880803 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641240494 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001505920 |
|---|
| Protein GI | 158313412 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0379281 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAGCA GACAGGCGCG GTCGGCGTCT CCGGCCGCGA TCCTCACACC GATCGTCGGA
CGGCTCGGTG ACATGTTCGG CAAGCGGCGG ATGCTGGTCG TCACCCTCGC GGCCTTCGCC
GTCGGCAACG CGCTGGCGGC TCTGGCACCG AACGTCTGGC TGCTGATCCT GGCGCGGGTG
GTGCAGGGGG CGGGCGGCGG CATCTTCCCG CTGTGCTTCG GCCTCATCAA CGACACGTTC
AGCGCGGAGC GCCGGCCCGG CGCGCTCGGG CTGGTCTCGG CGATCTCGGG AATCGGCGCC
GGCAGCGGCC CCGTCACCGG CCCCGGCCCC GGCCCCGGCC CCATCAGTCA CCCGCACCGT
CGGTGA
|
|---|
| Protein sequence | MRSRQARSAS PAAILTPIVG RLGDMFGKRR MLVVTLAAFA VGNALAALAP NVWLLILARV
VQGAGGGIFP LCFGLINDTF SAERRPGALG LVSAISGIGA GSGPVTGPGP GPGPISHPHR
R
|
|---|
| |