Gene Franean1_1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1570 
Symbol 
ID5669973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1876757 
End bp1877242 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content77% 
IMG OID641240489 
ProductGrpE protein 
Protein accessionYP_001505915 
Protein GI158313407 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.145005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0824427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACTG ACCACCCCGA CGGCGCGGAC CTGGCGGCCG AGCTGGAGGA GTCGCAGGCC 
AGACATCTGC GGACGCTGGC CGACTTCGAC AACTACCGCC GCCGGACCGG ACGGGAGATC
AGCGCCGCCA TGGCGGCCGA GCGGGACCGC GTCGTCCTCG CCTGGCTGCC GGTGCTCGAC
CACCTGGAGC TGGCCCTCGC CCACGCGGAT GCCGACCCCG ACTCCCTCGT CGACGGCGTG
CGCGGGGTGC GCCAGCTCGC GCTCGACGCG CTGCGGATCT CCGGCGTCGC CCGGCTCGAC
GACGAGACCG GCCCCTTCGA CCCGGCCCGG CACGAGGTCG GCGCCGTCGT CGACAGCGCC
TCGACGCCGC AGCCGCCCCC GGCGGGCACC GTCGTCGAGG TCCTGCGCCC CGGCGTCGAG
GCCGGCGGGC GGGTGCTGCG GCCGGCGTCG GTCGCGGTGA GCGCCGGCCC GCGGACGGCG
ACATGA
 
Protein sequence
MMTDHPDGAD LAAELEESQA RHLRTLADFD NYRRRTGREI SAAMAAERDR VVLAWLPVLD 
HLELALAHAD ADPDSLVDGV RGVRQLALDA LRISGVARLD DETGPFDPAR HEVGAVVDSA
STPQPPPAGT VVEVLRPGVE AGGRVLRPAS VAVSAGPRTA T