Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1570 |
Symbol | |
ID | 5669973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1876757 |
End bp | 1877242 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641240489 |
Product | GrpE protein |
Protein accession | YP_001505915 |
Protein GI | 158313407 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.145005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0824427 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGACTG ACCACCCCGA CGGCGCGGAC CTGGCGGCCG AGCTGGAGGA GTCGCAGGCC AGACATCTGC GGACGCTGGC CGACTTCGAC AACTACCGCC GCCGGACCGG ACGGGAGATC AGCGCCGCCA TGGCGGCCGA GCGGGACCGC GTCGTCCTCG CCTGGCTGCC GGTGCTCGAC CACCTGGAGC TGGCCCTCGC CCACGCGGAT GCCGACCCCG ACTCCCTCGT CGACGGCGTG CGCGGGGTGC GCCAGCTCGC GCTCGACGCG CTGCGGATCT CCGGCGTCGC CCGGCTCGAC GACGAGACCG GCCCCTTCGA CCCGGCCCGG CACGAGGTCG GCGCCGTCGT CGACAGCGCC TCGACGCCGC AGCCGCCCCC GGCGGGCACC GTCGTCGAGG TCCTGCGCCC CGGCGTCGAG GCCGGCGGGC GGGTGCTGCG GCCGGCGTCG GTCGCGGTGA GCGCCGGCCC GCGGACGGCG ACATGA
|
Protein sequence | MMTDHPDGAD LAAELEESQA RHLRTLADFD NYRRRTGREI SAAMAAERDR VVLAWLPVLD HLELALAHAD ADPDSLVDGV RGVRQLALDA LRISGVARLD DETGPFDPAR HEVGAVVDSA STPQPPPAGT VVEVLRPGVE AGGRVLRPAS VAVSAGPRTA T
|
| |