Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1568 |
Symbol | |
ID | 5669971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 1873741 |
End bp | 1874496 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641240487 |
Product | heat shock protein Hsp20 |
Protein accession | YP_001505913 |
Protein GI | 158313405 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.458268 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAACC CCGTGCGCGC AGGATCCGGC CGCCAGGTAC CGACCATTCG ATGGGATCCG CTCCGCGAGA TCGAGGACGC CTGGACCCGC ATGGGCAGCC TGCTCGGCGA CGTCACCGGC GGCGGCGAAC GGCGGCCCTA CGGCGTGCTG GCCGGACTGG CGCCGGCGGT GGACGTCGAG GAGACCGCCG ACGAGTTCGT CGTGGAGCTC GAGCTGCCCG GGGCCCGGGC CGAGGATCTC TCGATCGACC TCCGGGACAG CGAGCTGTTC GTCACCGGAG AGATCAGGGA ACGGGAGCGC CGCGGCACGC TGCGCCGCCA GACCCGCCGG GTGGGGCAGT TCGAGCACGT CATCCTGCTG CCCGGCGAGG TGGACCCGGA CGAGGTGAAC GCCAGCCTCG ACGACGGCCT CCTGACCGTC CGGCTGGCGA AGGCCCGCCG CAGCCAGCCC CGCCGTATCG AGATCTCCGC GCCGTCGGCC GAGCCGGGCC GCACCATCGA CAGCTCGTCC GGCGAACTCT CCCAGGACGA CTCCGAAGAT TCGGACTCCC CGCAGGCCGA CTCCACGAAG GCTGGTTCCG CGCGGGCCGG GTCCTCGCGG GGCGGCCGCT CGGGAGCCGG GTCGAAGGGA GCTGAGTCCA AGGGAGGCGG CGGGAAGGCG CGGCGGGCCG AGGAGTCCGG CGGCGGCCTG CCGGACGCTC CGACGCCCTT CGGGCAGAGC TCCTTCGGAG CCGCCGACTC ATCCGGCGCC GGCTGA
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Protein sequence | MTNPVRAGSG RQVPTIRWDP LREIEDAWTR MGSLLGDVTG GGERRPYGVL AGLAPAVDVE ETADEFVVEL ELPGARAEDL SIDLRDSELF VTGEIRERER RGTLRRQTRR VGQFEHVILL PGEVDPDEVN ASLDDGLLTV RLAKARRSQP RRIEISAPSA EPGRTIDSSS GELSQDDSED SDSPQADSTK AGSARAGSSR GGRSGAGSKG AESKGGGGKA RRAEESGGGL PDAPTPFGQS SFGAADSSGA G
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