Gene Franean1_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1568 
Symbol 
ID5669971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1873741 
End bp1874496 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content74% 
IMG OID641240487 
Productheat shock protein Hsp20 
Protein accessionYP_001505913 
Protein GI158313405 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.458268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACC CCGTGCGCGC AGGATCCGGC CGCCAGGTAC CGACCATTCG ATGGGATCCG 
CTCCGCGAGA TCGAGGACGC CTGGACCCGC ATGGGCAGCC TGCTCGGCGA CGTCACCGGC
GGCGGCGAAC GGCGGCCCTA CGGCGTGCTG GCCGGACTGG CGCCGGCGGT GGACGTCGAG
GAGACCGCCG ACGAGTTCGT CGTGGAGCTC GAGCTGCCCG GGGCCCGGGC CGAGGATCTC
TCGATCGACC TCCGGGACAG CGAGCTGTTC GTCACCGGAG AGATCAGGGA ACGGGAGCGC
CGCGGCACGC TGCGCCGCCA GACCCGCCGG GTGGGGCAGT TCGAGCACGT CATCCTGCTG
CCCGGCGAGG TGGACCCGGA CGAGGTGAAC GCCAGCCTCG ACGACGGCCT CCTGACCGTC
CGGCTGGCGA AGGCCCGCCG CAGCCAGCCC CGCCGTATCG AGATCTCCGC GCCGTCGGCC
GAGCCGGGCC GCACCATCGA CAGCTCGTCC GGCGAACTCT CCCAGGACGA CTCCGAAGAT
TCGGACTCCC CGCAGGCCGA CTCCACGAAG GCTGGTTCCG CGCGGGCCGG GTCCTCGCGG
GGCGGCCGCT CGGGAGCCGG GTCGAAGGGA GCTGAGTCCA AGGGAGGCGG CGGGAAGGCG
CGGCGGGCCG AGGAGTCCGG CGGCGGCCTG CCGGACGCTC CGACGCCCTT CGGGCAGAGC
TCCTTCGGAG CCGCCGACTC ATCCGGCGCC GGCTGA
 
Protein sequence
MTNPVRAGSG RQVPTIRWDP LREIEDAWTR MGSLLGDVTG GGERRPYGVL AGLAPAVDVE 
ETADEFVVEL ELPGARAEDL SIDLRDSELF VTGEIRERER RGTLRRQTRR VGQFEHVILL
PGEVDPDEVN ASLDDGLLTV RLAKARRSQP RRIEISAPSA EPGRTIDSSS GELSQDDSED
SDSPQADSTK AGSARAGSSR GGRSGAGSKG AESKGGGGKA RRAEESGGGL PDAPTPFGQS
SFGAADSSGA G