Gene Franean1_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1559 
Symbol 
ID5669962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1865846 
End bp1866277 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content69% 
IMG OID641240478 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001505904 
Protein GI158313396 
COG category 
COG ID 
TIGRFAM ID[TIGR00026] deazaflavin-dependent nitroreductase family protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.336696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.577316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGA AGATGTACAG CGCGCAGGAG ATCAAGGAGT TCATCGAGGA GTTCCGGGCC 
AACGGCGGCC GGCCCGCCGG CAGGTTCGAG GGCGCCACCC TGCTGCTGCT GGACAGTGGT
CCGGAGGCCG ACGGGTCGCC GCACGTGAGC CCGCTGAACT TCTACGCCGA ACGCGGCCGC
TACTTCGTGT TCGCGGCCAA CGACGGCGCG GACGAGGATC CGCACTGGAT GGAACAGCTG
CGGGCGAACC CGAACGCCAC GATCGAGGTC GACGGCCAGG TCCTCCGGGT CACGGCCACC
GAGCTGCACG GTGCGGAGCG CAGCGCGATG TACACCCGCC AGGCGCGGCG GTACCCGCAG
TTCGAGGTGC TGCAGGAGGC GACGTCCAGG GTCATCCCCG TCGTCGAGCT CGTTCCCGCC
GGCAACTCCT GA
 
Protein sequence
MSRKMYSAQE IKEFIEEFRA NGGRPAGRFE GATLLLLDSG PEADGSPHVS PLNFYAERGR 
YFVFAANDGA DEDPHWMEQL RANPNATIEV DGQVLRVTAT ELHGAERSAM YTRQARRYPQ
FEVLQEATSR VIPVVELVPA GNS