| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1554 |
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| Symbol | |
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| ID | 5669957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1860955 |
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| End bp | 1862088 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641240473 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001505899 |
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| Protein GI | 158313391 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.596284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGAAGC GGGCGTACCG CTACCGCTTC AACCCGACCC CCGATCAGGC CGCCCAGCTC
GCGCGAACCT TCGGCTGTGT CCGCTACGTG TACAACCGGG CGCTCGCCGA ACGGCACCGG
GCCTGGTTCC AGGAGCAGCG GCGGGTCACC CACGCCGAGA CCGACCGGAT GCTCACGGCG
TGGAAGCGCG ACCCGGAAAC GGAATGGCTC GCCGAGCCGT CGAAAGGCCC GCTTCAGGCC
ACGCTGCGGA ATCTCCAGAC CTCGTATGTG AACTTCTGGC AGAAACGCGC CGGCTACCCG
ACGTTCAAGA AGAAGGGCAG GACTCTCGAC TCGGCGACCT ACTTCCGGAA CTGTTTCAGT
TTTCGGGACG GTCGGATCAC GCTGGCGAAG CAGGACGGGC CGCTGGCGAT CGTCTGGTCG
CGTCCGCTGC CCGAGGGCGC GGAGCCCTCG CAGGTCACGG TGTCGCGGAA CGCCCGCGGC
CAGTACCACA TCTCGATCCT GGTCGAAGAG ACGATCACTA CGCTTCCCGC GTTGCCCGGG
CGGGTGGGGA TCGACGCGGG GGTCGCCTCG CTGGTCACCC TGTCGACGGG GGAGAAGGTG
GCCAACCCGA AGCACGAGCG TCGGGACCGG GCCCGGCTGG CCCGTGCGCA GCGGGACCTG
TCCCGGAAGG TGCAGGGGTC GGCGAACCGG GCGAAGGCCC GAGCGAGGGT CGCCCGGGTG
CACGGTCGGA TCGCCGACCG GCGTCGGGAT CATCTCCACG CGCTGTCCAC GAGGATCATC
CGCGAGAACC AAACGGTGGT CATCGAGGAT CTGTCCGTCC GCAACATGGT CAGGAACCAT
TCGCTCGCGC GGGCGATATC CGATGCTTCG TGGTCGGAGT TGCGGCGGAT GTTGGAGTAC
AAGGCCGGCT GGTACGGTCG CACCCTCATT GCGATCGATC GGTTCTATCC GTCGTCCAAA
ACCTGTTCGG TGTGCGGGTC GATCGTGAAG GAACTGCCGC TCAACGTCCG GGAATGGGCC
TGCCGTGGTT GCGGCACGGT CCACGACCGG GACGTGAACG CGGCGGTCAA CATTCTGGCC
GCGGGGCTCG CGGTGGCTGC CTGTGGAGAT GGAGTGAGAC CGCCTCGCTC CTGA
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| Protein sequence | MVKRAYRYRF NPTPDQAAQL ARTFGCVRYV YNRALAERHR AWFQEQRRVT HAETDRMLTA
WKRDPETEWL AEPSKGPLQA TLRNLQTSYV NFWQKRAGYP TFKKKGRTLD SATYFRNCFS
FRDGRITLAK QDGPLAIVWS RPLPEGAEPS QVTVSRNARG QYHISILVEE TITTLPALPG
RVGIDAGVAS LVTLSTGEKV ANPKHERRDR ARLARAQRDL SRKVQGSANR AKARARVARV
HGRIADRRRD HLHALSTRII RENQTVVIED LSVRNMVRNH SLARAISDAS WSELRRMLEY
KAGWYGRTLI AIDRFYPSSK TCSVCGSIVK ELPLNVREWA CRGCGTVHDR DVNAAVNILA
AGLAVAACGD GVRPPRS
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