Gene Franean1_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1545 
Symbol 
ID5669948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1846027 
End bp1846950 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content76% 
IMG OID641240464 
Productputative methyltransferase 
Protein accessionYP_001505890 
Protein GI158313382 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3315] O-Methyltransferase involved in polyketide biosynthesis 
TIGRFAM ID[TIGR00027] methyltransferase, putative, TIGR00027 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.499982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGG CCGGGGGTAG CCGGACAGCC GTGCTGGTCT GCCAGGGCCG GGCGGTCGCG 
GCCGGGCGGA TCGCTCCCGG CCGGTTCACC GACCCGGTCG CGGTCTCGCT CCTGCGGGCC
GACGAGCAGC GCACGGTCGA GCAGGTGCGG GCTGGCACAC CGCCCTCCGG CTGGCTCGAA
CGTGTCGACT ACGAGTCGGT GCGGGCCTGC GCGGAGATCG TCGTCCCGCG CACGATCGCG
ATCGACGACG CGGTGCGCGA GCGGACCTCC CCGCAGGTCG TACTCCTCGG CGCCGGCCTG
GACGACCGGG CGTGGCGCAT GCCGGAACTC GCCGACCGCG TTGTCTTCGA GGTCGACCAC
CCGGACTCCG CGCGCGACAA GCGTCAGCGG CTCGCCGGGC TGCCGGCGCC GACGCGGCCG
ACGCGGCCCG GGGAGCCCGG GGAGCCCGGG GAGCCCGGGG AGCGCGTGCG GTTCGTCTCC
GTCGATCTCA CCCGCGACCG GCTCGAAGGC GCCCTGGCCG CCGCCGGCCA CCGGGCCGAC
ACGCCCACGA CCTGGATCTG GGAGGGTGTC GTCCCGTATC TCACCCGCCC GGAGGCCGCC
CGGACCGTGG CCGCCGTCGC GACCCTGTCG GCCCCGGGCA GCCGGCTGAT CGTCAACTAT
CAGGCCCCGC AGGCCGCGAT CGCGATCGGG CAGCTGATCG CCCGCTCGAT GGACGTCCTG
GCCCGCCGCC GCGGGATCTG GGCGAACGAG CCTTGGAGGT CACGCTGGAC GGCATCCGCG
ATGCGGGACC TGCTCGGCCG CAACGGCTTC ACCGTGCGCA GCGACGATGA CCTGCTCACC
ATCGCGACCA GGCTGACGAC GCCCACGCCG CGTCGCGCCT CGCTGCGCAG CGGTCGGGTC
GCCGTCGCCG ACCGACCGGC CTGA
 
Protein sequence
MKAAGGSRTA VLVCQGRAVA AGRIAPGRFT DPVAVSLLRA DEQRTVEQVR AGTPPSGWLE 
RVDYESVRAC AEIVVPRTIA IDDAVRERTS PQVVLLGAGL DDRAWRMPEL ADRVVFEVDH
PDSARDKRQR LAGLPAPTRP TRPGEPGEPG EPGERVRFVS VDLTRDRLEG ALAAAGHRAD
TPTTWIWEGV VPYLTRPEAA RTVAAVATLS APGSRLIVNY QAPQAAIAIG QLIARSMDVL
ARRRGIWANE PWRSRWTASA MRDLLGRNGF TVRSDDDLLT IATRLTTPTP RRASLRSGRV
AVADRPA