| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1526 |
|---|
| Symbol | |
|---|
| ID | 5669930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 1828206 |
|---|
| End bp | 1829051 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641240446 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001505872 |
|---|
| Protein GI | 158313364 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00134054 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGG AAACGAGCAG CTCTCCACTG GATTGTCCGA AGAAACGTGT TGGACTGAGA
GGACTTGCCG CGATGAGATG GGGACCGTCC CTTCGTTCCG AGATTCCCGA CGTAGCGTCG
ATCGTAGACG CGACAACAGC CGCCCTGATG GAATGTTTTA AAAACGAACT GGTCGGCATC
TACCTATCCG GCTCCCTATC CATGGGAGAT TTCGACCTGA ACAGCAGCGA CATTGACTTT
GTGGTGGTAC TGCGGCGTCC CCTGGGAGAT GCCGCGTTCC TTGCCGCGCT ACGGGAGACC
CACAATCGGC TTAGAACCGA TGGCGGCTGG TGGGGGACGC GGTTGGAGGT GGTCTATCTT
CCGGTCCATT TCTGCCGTGC TACATCTCTT GAACGAGCGC AACACTGGAT GTTAAACACA
AGTGGCGAGC TGGTTTTGAG TAAGCCAAGA TCGGATTGGA TTGTACAAAT GTATATTGCT
CGGGAGTACG GCCCGCATCT AGCGGGGTCG ACGGCAGCCG AGACGATAGC CGAGGTGACC
GAGGACCAAT TGCGTGCGAG TGTTCACGGG GCGGCGCCCT TTATCCGGCG TCCGGAAGGT
GATGTGCAAA TTGAGCGCAC ACTAGCATTA CATGTACTCT CTGCTTGCCG ACTTCTGTAC
ACGAAGATGC TCGGTACGAT CGCGACGAAA TCGCAAGCTG CTACATGGGC GGAGAATTTT
TTTCATGGAG AATGGAGCGC CGTTATCGGC TCGGCCCTTG CGACCCGTGG CGGCCGACGT
CCCGTTCCCT GCGCGTCCGG CTACGCCCTC GTGGAAGAAA TCGAATCCTT GCTTGCCAGA
GATTAG
|
|---|
| Protein sequence | MAKETSSSPL DCPKKRVGLR GLAAMRWGPS LRSEIPDVAS IVDATTAALM ECFKNELVGI
YLSGSLSMGD FDLNSSDIDF VVVLRRPLGD AAFLAALRET HNRLRTDGGW WGTRLEVVYL
PVHFCRATSL ERAQHWMLNT SGELVLSKPR SDWIVQMYIA REYGPHLAGS TAAETIAEVT
EDQLRASVHG AAPFIRRPEG DVQIERTLAL HVLSACRLLY TKMLGTIATK SQAATWAENF
FHGEWSAVIG SALATRGGRR PVPCASGYAL VEEIESLLAR D
|
|---|
| |