| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1499 |
|---|
| Symbol | |
|---|
| ID | 5669903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 1800719 |
|---|
| End bp | 1801591 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641240419 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001505845 |
|---|
| Protein GI | 158313337 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0707299 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACCAA TGGCGGGAAC TGCCGCGGAG TGGGCAGCGA CTCAGGTCGC CACGGTGCGC
GATCACCCCC GGGGGCGGAT GGCGCTTCTG TCGCGCACAT ATCACGGACC GGTCGGGCGC
GCGCCGCGAC ACCTGCCTTT CCGGAGAGCG GCGATGTCGT TCATGTACTG GCAGGTCGAG
CGGGGGGTGC TGAATCCTCC GGAGACAGAC CCTCCGGGGA GCCGGTGGTG GCGGAAGGTC
AATGACCGGC TGCTACTCGA CGGTTGTGAG GCCATGGCGC GTTCGGGCGG CCTGCGGGGG
GAGCAGTCCT CGCCGACGGT CGACCTGTGG TCGGCGTTCA TCAGTGCACC GACCTCCTGG
AGCTGGTACC GCGCCCACAA CGCGAGCATC GTCTCCGCCT ACCTGGAAAA CCGTGATCTC
GCCGAGTTGG AGTCAACGAC CGAGCGCTTC TTTCTCAACG TCGTCCTGCT CCGTGTTCTG
TATGCGCACG CGCTGGTCGC GGCGCCGCGG CTGTCGCTGG GCCGGCTCGC TGTCCTGGGC
CGGGCCATCG GCGATCCACG GCTCGGGATG GCAGGAATAT TTCTCTCACT CGGCCGGGTC
CTTCCCGACC GCTACCCACC CGACGATGAT CTACAGGTTT ACCTCGCAGA TGAGCATGGT
CTCGGGCGGA TACTCGACTA CGGCGTGATC CAGCCGCGGC TTCAGCAGTT GTACGAGTGG
TCCGCACTGG AACTCGGTCT TCCCGGGCTA CGCGGCCTCA TACGGGACGG CAACCCGACC
TACGCGTGGT CCTACGAAGA ACGACACGTC TGGGCATCCG GCCACGCATC GCTGCCGGTG
CGCGTTCTGC GACGGGCGAC GTCGCCACGG TGA
|
|---|
| Protein sequence | MRPMAGTAAE WAATQVATVR DHPRGRMALL SRTYHGPVGR APRHLPFRRA AMSFMYWQVE
RGVLNPPETD PPGSRWWRKV NDRLLLDGCE AMARSGGLRG EQSSPTVDLW SAFISAPTSW
SWYRAHNASI VSAYLENRDL AELESTTERF FLNVVLLRVL YAHALVAAPR LSLGRLAVLG
RAIGDPRLGM AGIFLSLGRV LPDRYPPDDD LQVYLADEHG LGRILDYGVI QPRLQQLYEW
SALELGLPGL RGLIRDGNPT YAWSYEERHV WASGHASLPV RVLRRATSPR
|
|---|
| |