| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1497 |
|---|
| Symbol | |
|---|
| ID | 5669901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 1798672 |
|---|
| End bp | 1799706 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641240417 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_001505843 |
|---|
| Protein GI | 158313335 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0703519 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCACGTG CGATCGTGTT CAAGGGTGAC GAGACCTGGG AGCTTCGAGA GGTCCCGAAG
CCGGCGTTAA GGCCGGGATG CGCGGTGCTG CGGGTCGAGG CGGTCGGCAT CTGTCACAGC
GATGTCGACC AGTTCAGGGG GCACGCGCCG GTGCCGTCGG GTGGGGTGTT CCCCGCCGTT
CCCGGTCACG AGATCGTCGG TCGGATCGAA GAGATCACCC CGGAGGCGCA GGAAGAGTTC
GGCGTCCGGG AAGGCGACCG GGTCGGGGTC CGTTCAGTGG TGCGCGGGCC TACCGGGAGC
AGGGTGTACG GGTTCGACTT TCCTCTCGAT GAGGGCTCCG GGCTCTTCGG CGGCTATGCC
GACTACATGG AGCTCGTGCC CGGCTCGGAG GTCCACCGGC TTCGCGACGA CCTGCCGGCG
ACCGAGTTGA CGGTCTACGA GTGCCTGACC AACGCGATCA CGTGGATCCG GCCGGTGCAG
CCCGGCCAGA CTCTGGTGGT GGAGGGCCCT GGCCACATGG GGCTGGCCGC GATCGTCGGC
GCCCGTGCGG CCGGCGCTGG AACGATCATC GTGACCGGGC TGGCCGGCGA CCGGCTCCGA
CTCGACACCG CGCTCAAGGT CGGCGCGGAT CACGCCATCG ATGTGGAGAA CGAGGACGTG
GTCGCCCGCG TCGCCGAGAT CACCGGCGGA GCGATGGCGG ACGTCGTCCT CGACGCCGCG
TCAGGCAACC CGGTGACGCT GAAGACCGCC ATGCGGATCG CCCGGACCGG CGCCACGATC
GTCGCGGCCG GGATGAAGGA CCGACTTCTC GACGGATTCG ACGTCAGTCA GATCCCGCTG
CGTCATCTGA CCATCGCGCC CGGCGGCGGC CTCGACCTGG CCGGCGCCTG CACAATGATC
AACGAGGGGA CGGTGCCCAC CGGCGTGCTC CACGGCGCGT CGTTCCCGCT GGAACAGTTC
GAAGACGCGC TGGCGCTGGC CGATCGACGC GTGCCCGGCC AGGACGCGGT ACGCGTTTCC
CTCAAGGTGG CCTGA
|
|---|
| Protein sequence | MPRAIVFKGD ETWELREVPK PALRPGCAVL RVEAVGICHS DVDQFRGHAP VPSGGVFPAV
PGHEIVGRIE EITPEAQEEF GVREGDRVGV RSVVRGPTGS RVYGFDFPLD EGSGLFGGYA
DYMELVPGSE VHRLRDDLPA TELTVYECLT NAITWIRPVQ PGQTLVVEGP GHMGLAAIVG
ARAAGAGTII VTGLAGDRLR LDTALKVGAD HAIDVENEDV VARVAEITGG AMADVVLDAA
SGNPVTLKTA MRIARTGATI VAAGMKDRLL DGFDVSQIPL RHLTIAPGGG LDLAGACTMI
NEGTVPTGVL HGASFPLEQF EDALALADRR VPGQDAVRVS LKVA
|
|---|
| |