Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1459 |
Symbol | |
ID | 5669863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1755668 |
End bp | 1756501 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641240379 |
Product | hypothetical protein |
Protein accession | YP_001505805 |
Protein GI | 158313297 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.37426 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGATGGG ACTTCAAGTC GGTGGCGCCT GACGCGGAAG AGAGCGGTCA GGTAGCCGAT CTCAGGATGG ACCGGCCGAC ACCGGCGCGC ATGTATGACT ACTTTCTCGG GGGCAAGGAC AACTTCGAGG TCGACCGCGA GGCTGCTGCT GCTGTCGACG CCGCCCTCGG TAAGACGGTG ACGTTTGACA TCGTCTGGGA GAACCGGCGC TTCCTGCAGC GGGCGACCCG TTGGCTCGCG AACGCCGGTA TCGGCCAGTT TCTCGACATC GGCACCGGCC TGCCGACCCA GGGGAATGTG CACGAGATAG CCCAGCAGGT CAACCCGGAC GCGCACGTCG TCTACGTAGA CAACGACCCG ATCGTGCTCG CTCACGGCCG CGCGCTGCTG GCGACGAACA AGACGACGAC AATCATCACC GCGGACGCAC GCGAACCCGC GGGGATCCTC GCGCATCCGG ACACGAACGC GCTCATCGAC TTTTCGCGAC CCGTCGCCGT TCTGGCGGTC GCCTTGTTCC ATTTCATTAC GGATGAGGAG AACCCCGCCG GTCTTCTCGC CGAATTTATG GACGCCGTTC CATCGGGTTC CTACCTGGTG CTATCCCATC TGACAACGGA TGGGCCGCCG GCTGAAGGTG TCGCCCGGAC GGAGGCGGCG TATGAGAAGG CGACGTCGCC TATAGTCTTC CGGCCGCGTA TCGCGATCGA GAATTTCTTC TCCGGGCTGG ATCTGGTCGA ACCCGGTATC GTTCGACCAT GGCAGTGGCA CCCGGGAGAC GACGGCAGCC CTGAGACTGA CTGGCTGTCC GCAGGAGTAG CGCGCAAGCC TTGA
|
Protein sequence | MGWDFKSVAP DAEESGQVAD LRMDRPTPAR MYDYFLGGKD NFEVDREAAA AVDAALGKTV TFDIVWENRR FLQRATRWLA NAGIGQFLDI GTGLPTQGNV HEIAQQVNPD AHVVYVDNDP IVLAHGRALL ATNKTTTIIT ADAREPAGIL AHPDTNALID FSRPVAVLAV ALFHFITDEE NPAGLLAEFM DAVPSGSYLV LSHLTTDGPP AEGVARTEAA YEKATSPIVF RPRIAIENFF SGLDLVEPGI VRPWQWHPGD DGSPETDWLS AGVARKP
|
| |