Gene Franean1_1445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1445 
Symbol 
ID5669850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1739252 
End bp1739521 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content58% 
IMG OID641240367 
Productexcision promoter, Xis 
Protein accessionYP_001505793 
Protein GI158313285 
COG category 
COG ID 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.347702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGTCC ATCAAGATAT CGATCTTCCC AAGGGAGCCA GAATGCCGAC GAGAGTCTCA 
GGCTCGGCGA TGACCACCGG CAGTTCCGAG AAGAACAACG CACGTCTCTG GACGGCAAAT
GACCTGGCCC GATATCTCGG CGTGCCGGTC AATACGATCT ACAAATGGCG AAGTACCGGG
GAGGGGCCTC CCGCATACAA GGTCGGACGG CATCTCCGCT TCGACGCGCA GGAAGTAGCT
GACTGGCTGG AAAGACAAAG GAGCGAATAG
 
Protein sequence
MQVHQDIDLP KGARMPTRVS GSAMTTGSSE KNNARLWTAN DLARYLGVPV NTIYKWRSTG 
EGPPAYKVGR HLRFDAQEVA DWLERQRSE