Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1434 |
Symbol | |
ID | 5669839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1728877 |
End bp | 1731072 |
Gene Length | 2196 bp |
Protein Length | 731 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641240355 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001505782 |
Protein GI | 158313274 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.278277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTTCGCTC AGGATCCGTC GCCGGCGCGG TCAGGGCGTC GACGGGCCGC GCACGTCCTG GCCCTGGCCG GGCTCGCGCT GGCCGTCGCC GGCGGGGTGC TGGCCGTGGC CAACCGGCAT GGGGATCTCA CGCCGTCCGG GGACTCCGCG AGCATGGCGG GCTGGACCCA GGTCGTCCTC GCGGTTCCGT TCGTGGCGGC CGGATGGCTG CTGGCAGTGC GCCGGCCGGA GGTTCCGTTT GGTTGGTTGG CTCTGGCCGC CGCGATCGGC CACGGCGCGG CGGCCGCCGG CACAGGCTGG GCGGTGTTCA CTGTGTTCGG CGGGCGGGAT CTGCCGGGGG CCGCGCCGGC GCTCCTCGCC GGCTCCACGT GTGGGGCGCT GGAGCCCCTC GTGCTGGTGA TTATCTGGGC GACGTTCCCG CAGGGACGGT TCCCCCGCGG CTGGATCGGG CGGGTCGCGG CGGTCAGCGT CGGGTTGTGT GCCGTGGGCT GGCTGAGCGG GCCGCTGTGG TCCTTCAGGT CCGGCGAGTC TCCGCCGGTC TATGCCGGTC TCACCAATCC GATCGGGGTG GATGCCATCC CCGGTTGGCT GCCGGTCGCG CTGTTCTCCT CGGGCCTGCT GCTCGGGTCG GCCGTGATGG TGGTCCGCTG GACGCGGGCG GACGGCGAGC TGCGCCAGGT GCTGCGCTGG CTGGCCGTGA TCAACACGGC CGCGATCGTA CTCACCCCCG TCGTCGTCGC GCTTCCTGCC GGAGAGCTGA TCGGCAGTGT CGGCACCGTG GTCGAACTCG TCGTCGTCGT CGCCGTGGTG CTCGCGAACC GTGTCTACGG CATCGAGGCG GTCCTCAACC GCACGCTCGT ATACACGCTG CTCACCGCGT TCGTGGCCGT CGTGTACGCG GCCGGCGTCG CGGTCCTCGC CGCGTTCGGC CAGCAGGTGG GCGGGACGTC CACGGTGCTC GCCGCGGTCG GCGCGGCGTT CAGCCTCGCC CCGGCACGCG ACCGGGTGCA ACGCATGGTG AACCGCTTTC TCTACGGCGA ACGCGACGAG CCGTACACCG TGGTGACCGG GGTGGCGGCG CGCCTGGAAG CGGCGGGCAG CGTACAGACC CTGCTGCCGG GCCTGCTCGA AGCCCTGGTC GGGGCGCTGC GGCTGCCGTC TGCCGCGGTG GAGATGCGCG GCGACGACGG TTCCGCCCGT TCCATCACCC ACGGCGAGGC CGCGCGGCCG GGCGCGTCGG TCCGCTTCCC GCTGGTGCAT CAGGGGCAGG ACATCGGCGC GCTCGTCGTC AGCCTGCGGG CCGGGCAGAA CGCGCTGGCT CCGCGGGAGA ACCGCCTGCT CACCGACATC GCCCGCCAGG TCGCGGTGGC CGCCAGCAAC GTGCAGCTCA CCGAGGCGCT GATGCGCTCG CGCGAGCGCA TCGTCAGCGC GGCGGAGGAG GAACGCCGCC GGCTGCGCCA CGACCTGCAC GACGGTCTCG GACCCACGCT GACCGCCGCC GCGACCAAGG TGGACGCCGC CGGCAACCTC GTCGACCGGG ACGTGGCGCG GGCCAGGAAC CTGCTCGACT CGGTCCGGCG GGACCTCACC TCGGCCCTCG CCGACCTGCG CCGCCTGGTC TACGCCCTGA GGCCGCCCGT CCTCGACGAA CTCGGGCTGC TGCCCGCGCT GCGCGAGCAG CTTCGGCACG CCGCGGTCCC GGTCGTGGTG TCGGCGCCCG AATCCCTGCC GCCGCTGCCG GCGGCGGTGG AGATCGCCGC TTACCGGATC ATCACGGAAG CCATCACGAA CGTCACCCGG CACGCCCGGG CGTCGTCCTG CGAAGTGTCG ATCACCTGCG TCGATCACCT GCGTGTCGAG ATCCGCGACA ACGGAACAGC CGGAGACGGC GCGACAGGAG ACGGCGCGAC AGGCGACACC GCGACAGGCG GCACCGCGAG CGGGAGCGGG AGCGGAGCAA CATGGGCACC CGGGGTCGGC CTGACCTCGA TGCGGGAACG GGCGACCGCG CTCGGTGGCA GCTGGATCGC CGGACCCACC GCTACCGGCG GCCGGGTCCT GGTAGAACTC CCCCTCTCCC TCGCCGGAAG CGCGATACCC CGGTCCGCCG CCGTGGTCGC TCCAGAAAGG GATCACGGAT CTTCTTCATC CGCGCACACC GACGTCACCG GAATGCTCAC GAGGAGCCAG CAGTGA
|
Protein sequence | MFAQDPSPAR SGRRRAAHVL ALAGLALAVA GGVLAVANRH GDLTPSGDSA SMAGWTQVVL AVPFVAAGWL LAVRRPEVPF GWLALAAAIG HGAAAAGTGW AVFTVFGGRD LPGAAPALLA GSTCGALEPL VLVIIWATFP QGRFPRGWIG RVAAVSVGLC AVGWLSGPLW SFRSGESPPV YAGLTNPIGV DAIPGWLPVA LFSSGLLLGS AVMVVRWTRA DGELRQVLRW LAVINTAAIV LTPVVVALPA GELIGSVGTV VELVVVVAVV LANRVYGIEA VLNRTLVYTL LTAFVAVVYA AGVAVLAAFG QQVGGTSTVL AAVGAAFSLA PARDRVQRMV NRFLYGERDE PYTVVTGVAA RLEAAGSVQT LLPGLLEALV GALRLPSAAV EMRGDDGSAR SITHGEAARP GASVRFPLVH QGQDIGALVV SLRAGQNALA PRENRLLTDI ARQVAVAASN VQLTEALMRS RERIVSAAEE ERRRLRHDLH DGLGPTLTAA ATKVDAAGNL VDRDVARARN LLDSVRRDLT SALADLRRLV YALRPPVLDE LGLLPALREQ LRHAAVPVVV SAPESLPPLP AAVEIAAYRI ITEAITNVTR HARASSCEVS ITCVDHLRVE IRDNGTAGDG ATGDGATGDT ATGGTASGSG SGATWAPGVG LTSMRERATA LGGSWIAGPT ATGGRVLVEL PLSLAGSAIP RSAAVVAPER DHGSSSSAHT DVTGMLTRSQ Q
|
| |