Gene Franean1_1430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1430 
Symbol 
ID5669835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1726087 
End bp1726869 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID641240351 
Productmethionine aminopeptidase, type I 
Protein accessionYP_001505778 
Protein GI158313270 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA TCCTGAGCCC GGCCAAGCTG GCTCAAGCAA AGGACACAGG CGCCCTGGTC 
GCCGACATTC TGCAGACGCT GAAGAGCCGC AGCACGGTCG GCACAAGCCT CCTGGACATC
GATCGGTGGA CCAAGACCAT GATCGTCGAG GCTGGGGCGC AGTCCTGCTA CGTCGACTAT
GAGCCGTCCT TCGGACGCGG GCCGTTCGGC CACTACATCT GCACGGCCGT CAACGACGCC
GTGCTCCACG GACTGCCCTA CGACTACACG CTTGCCGACG GCGACCTGCT GACGCTCGAC
CTCGCCGTCT CCAGAGACGG AGTCGCTGCA GACTCCGCCA TCAGCTTCAT CGTGGGCGAC
TCAAAGCCCC CGGAGAGCGT CGCGATGATC AACGCGACCG AACGCGCGCT GTACGCAGGG
ATAACCGCTG CCGGCCCCGG GGCTCGCATC GGCGACATCT CCCATGCCAT CGGCTCCGTC
CTCGGCGAGG CAGGGTACCC GATCAACACC GAGTTCGGAG GTCATGGCAT CGGATCAACG
ATGCACCAGG ACCCGCACGT TTCGAACACC GGACGGCCCG GCCGTGGATA CAGACTGCGC
CCTGGGCTGC TGCTCGCACT GGAGCCGTGG GTCATGGCGG ACACCGCCGA GCTCGTCACC
GATGCCGACG GCTGGACCCT CCGAAGCGCG ACAGGCTGCC GGACAGCACA CAGTGAGCAC
ACGATCGCCA TCACCAACGA CGGAGCCGAA ATCCTCACCT TGCCAAAGCA GGTGCAGCCG
TGA
 
Protein sequence
MIEILSPAKL AQAKDTGALV ADILQTLKSR STVGTSLLDI DRWTKTMIVE AGAQSCYVDY 
EPSFGRGPFG HYICTAVNDA VLHGLPYDYT LADGDLLTLD LAVSRDGVAA DSAISFIVGD
SKPPESVAMI NATERALYAG ITAAGPGARI GDISHAIGSV LGEAGYPINT EFGGHGIGST
MHQDPHVSNT GRPGRGYRLR PGLLLALEPW VMADTAELVT DADGWTLRSA TGCRTAHSEH
TIAITNDGAE ILTLPKQVQP