Gene Franean1_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1411 
Symbol 
ID5669817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1708251 
End bp1708694 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content67% 
IMG OID641240334 
ProductMarR family transcriptional regulator 
Protein accessionYP_001505761 
Protein GI158313253 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.168618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACAACA ACGACCACAT CACGTGGCTG CTGAAGCAGG CCATGCACTA CAGCCGACGC 
ACCGTGAACA CCGCTATCCG CAACTACGGC GTGACCTCGG AACAGCTCGG CGTCCTGAAA
CGACTGGCCG ACAACCCGGG CCTGTCCGGC GCGGACCTGG CCCGCCGGCT TCTCATCACG
CCGCAGGCGT CCCAGCTGGC GCTGGCCACA CTCGAGCGCC GCGGCCTGAT CGAACGGAGA
CCCGACGCCA ACCACGGCCG GATCCTGCGC TCCTACCTCA CCGACGAGGG CCTGCGCGTC
TGCACCGAAT GTTTCAATGA CGCGATCGCC AGCGAGGAGC GGTTGCTCGA CGTTCTCGAC
GCCACCGAGC AGGAAATGCT CCGGGAGTTC CTGCGGCGGC TCGTCGAGCG CGCGCCGAAG
GACGACGACG CCGCGGAGGA ATAG
 
Protein sequence
MDNNDHITWL LKQAMHYSRR TVNTAIRNYG VTSEQLGVLK RLADNPGLSG ADLARRLLIT 
PQASQLALAT LERRGLIERR PDANHGRILR SYLTDEGLRV CTECFNDAIA SEERLLDVLD
ATEQEMLREF LRRLVERAPK DDDAAEE