| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1407 |
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| Symbol | |
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| ID | 5669813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1703903 |
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| End bp | 1704673 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641240330 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001505757 |
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| Protein GI | 158313249 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTACAA ACACCTCTGA GCAGCGGGCA CGGCGGGTGG CCGTGGTGAC GGGCGGCGCC
TCGGGCATCG GACGTTCGGT CTGTGAGCAG CTCGCGGCCG CCGGGCACCG CGTCGCGGTA
CTCGACCTGG ACGGCGAGGC GGCACACGCG GTGGCCGGTG AGCTGGGTGC CGGCGGCGCT
GATGCCGTGG CCTGTCAGGT CGACGTGGCC GACCGGGAGT CTGTCGACAC GGCGGTCGGA
AAGGTCCGTA GCGAGCTGGG GCCCGTGGAC ATCCTGGTCA CGAGCGCGGG CAAGGCGGCG
TTCGAGCCGT TCCTGGACAT CACCCTCGAG GCGTGGAACA ACATCCTCGC GGTCAACCTG
ACCGGCACGT TCCACTGTGT CCAGGCGGCG ATCACCGACA TGGTCGAAGC CCGGTGGGGC
CGGATCGTGA CGATCTCCTC GTCGAGCGCG CAGCGCGGGT CGCCCCGGAT GGCGCACTAC
GCCGCGTCCA AGGGCGGAGT CATCACACTG ACGAAGTCGC TGGCCCGCGA GTTCGCGCCG
TTCGGGATCA CCGCCAACAC GATCCCGCCG TCCACCATCG ACACCCCGAT GGCACGCCAG
TCCCAGTCTG TCGGTGACCT GCCCGGCGCC GAGGTCATGA TTAAGGCGAT TCCCCTGGGG
CGGCTGGGAA CAGGTGACGA CATCGCCGCT GCCTGCGCCT TTCTCTGCTC CGACGGAGCC
GGTTACATCA CCGGTCAGGT GCTCGGCGTG AACGGTGGGT CGGTCATCTG A
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| Protein sequence | MSTNTSEQRA RRVAVVTGGA SGIGRSVCEQ LAAAGHRVAV LDLDGEAAHA VAGELGAGGA
DAVACQVDVA DRESVDTAVG KVRSELGPVD ILVTSAGKAA FEPFLDITLE AWNNILAVNL
TGTFHCVQAA ITDMVEARWG RIVTISSSSA QRGSPRMAHY AASKGGVITL TKSLAREFAP
FGITANTIPP STIDTPMARQ SQSVGDLPGA EVMIKAIPLG RLGTGDDIAA ACAFLCSDGA
GYITGQVLGV NGGSVI
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