Gene Franean1_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1400 
Symbol 
ID5669807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1696695 
End bp1697351 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content61% 
IMG OID641240325 
Productmethyltransferase type 11 
Protein accessionYP_001505752 
Protein GI158313244 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGGAC ATGCTGATCC GGTAGCCGCC AGCACAGCAG CGTGGGAACA ACACGCACAG 
AAGCGCATTG CGGCTGGTGA TATCGACGAG CGCCCTGCTG TCCACAGATT CCGCTGGACT
CGCACCGGCG TTGGAGACCC GGGGATCGAG ATCCTCGGAG ATCTTCAAGG AAAGCGCGTT
GTCGAACTCG GCTGTGGCGC GGGCGATAAT CTCGCCTATC TGGTCGATCA CTGCGGTGCT
CGCGGCATCG GGATCGACCC GGCTCCTTCC CAGATCTACC GCGCACGGAC CCGATGGCCA
AATCCGATCT TCCATTGCAC CGATGCGGTC AGCTATCTTG CCACATGCGG TCCCGTGGAT
GTCTTCTATA GCGTTTTCGG TGCAGTCGGA CGATGCCCGC CGGAGGCCCT GTTCCGCCAG
ATCCATGAGC GTCTGAAACC CGGCGGACGG CTCGTCTTCT CACTGTTGGA TGAGTCTTCG
GCGGTGCGTT CATCCGCAGA GCATGAGCCA GGCCTGCGTG GGAGCTACCA GGCAGGCTTG
CGTGAGTGGC TGGAGAGACT TCGATATTCC GCGTTCCCGA AATCCGAGGT CTCCTTGGCG
GACGAGAGTC TCACTCCGAG CACTCTGATC TTTTCGTGTG CGAGGCCGGG TATTTGA
 
Protein sequence
MPGHADPVAA STAAWEQHAQ KRIAAGDIDE RPAVHRFRWT RTGVGDPGIE ILGDLQGKRV 
VELGCGAGDN LAYLVDHCGA RGIGIDPAPS QIYRARTRWP NPIFHCTDAV SYLATCGPVD
VFYSVFGAVG RCPPEALFRQ IHERLKPGGR LVFSLLDESS AVRSSAEHEP GLRGSYQAGL
REWLERLRYS AFPKSEVSLA DESLTPSTLI FSCARPGI