| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1394 |
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| Symbol | |
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| ID | 5669801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1690153 |
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| End bp | 1691343 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641240319 |
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| Product | integrase family protein |
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| Protein accession | YP_001505746 |
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| Protein GI | 158313238 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0589061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCA CCGGCAGACC ACCCCTCGGC CTCGGAACGT ACGGTGAGAT CCGGGTCTAC
AAGATGGACT CCGGGCGTTA CAAGGCCCGC ACGCTCTACC GCGACTTCGA CGGCGTGACC
CGCCCGGTCG CCCGGAACGG CGCGAGCAAG AACGCCGCGG AGACGGCCCT CAAGAACCAC
CTCCGTGACC GCGTCCGGGA GGCCGGAGCC GAGGCAGAGA TCACCGCGGG GTCGACCGTC
GAGGTGCTCG CCGAGGCGTG GTGGGCCGAG TTCTCCAAGC AGGACAAGTC CCCCGGCACC
TTCCGCCTCT ACCGCGACCG GCTGGACAAC CAGATCATCC CGGCACTCGG AAAGATCCGG
ATCCGGGAGC TCACGACTGG GGCCGCCAAC CGGCACATCA GTACGGTCAG CCAGAACAAC
GGCGCTGGCG TGGCCAAGGC AACCCGCACG GTCCTCAGCA ACATGTGTGC CTTCGCCTGC
CAGCGCGACG TGATGAAGAC CAACCCCATC CGCGAGGTGG CCCCGGTCCG GCCGAAGGCC
AAGAAGGTGC CGAAGGCTCT CAGCGTCGCC GAGCTCCAGC AACTCCGCGC ATTGTTCACT
TACGACCCCG CCGCGGTGCG CCGAGACATC CCCATGCTGT CGAGCATCCT GCTGGCGACC
GGCGTGCGGA TCGGAGAGTG TCTGGCGTTC GTCGAGGACG CCCTCGACCC CAAGGAGGGC
TCGATCGAGG TGCGCGGGAC GGTGATCTGG CTCAAGGGGG TCGGACCCAT CGTCAAGCCC
GCACCGAAGA GCGCCGCGGG CTTCCGGCGG CTCCTGCTAC CAAAGTGGGC CGTCAACCTG
CTTCGGTCCA GGTTCGAGGA GTCAGCCGTG ATCAGCAAGC CAGTGCCGGT GCTGAACGGC
GAGGCATGGG ACTCCCCGCT GGCGTTCCCC ACATCCACAG GGCGGCTGCG GGACATCACC
AATGTCGAGA GTTACTGGCG AGAAGCCGTC ACCACCGCAG GATTCGACTG GGTGGTGCCC
CACACTTTCC GCAAGACCGT CGCCACCGAG ATGGACCGCG CGGGTCGGAC AGCACGCGAA
ATCGCGGACC AGCTCGGCCA TTCTCAGATC ACACTGGTAC ACAATACTTA CCTAGGCCGC
AAAGCCCGTG ACACCGGCGC CGCCGCAGCT CTTGAAGGGC TGGTCGCATG A
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| Protein sequence | MPRTGRPPLG LGTYGEIRVY KMDSGRYKAR TLYRDFDGVT RPVARNGASK NAAETALKNH
LRDRVREAGA EAEITAGSTV EVLAEAWWAE FSKQDKSPGT FRLYRDRLDN QIIPALGKIR
IRELTTGAAN RHISTVSQNN GAGVAKATRT VLSNMCAFAC QRDVMKTNPI REVAPVRPKA
KKVPKALSVA ELQQLRALFT YDPAAVRRDI PMLSSILLAT GVRIGECLAF VEDALDPKEG
SIEVRGTVIW LKGVGPIVKP APKSAAGFRR LLLPKWAVNL LRSRFEESAV ISKPVPVLNG
EAWDSPLAFP TSTGRLRDIT NVESYWREAV TTAGFDWVVP HTFRKTVATE MDRAGRTARE
IADQLGHSQI TLVHNTYLGR KARDTGAAAA LEGLVA
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