Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1387 |
Symbol | |
ID | 5669795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1678872 |
End bp | 1680320 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641240313 |
Product | hypothetical protein |
Protein accession | YP_001505740 |
Protein GI | 158313232 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATCGTGC TGGCGCGCAC GCGGCTCTCA CCGAGAGGGG GCCTGCTGTC GCTCACCGAG CATCCGCTGC AGCGGGCCGG GGCGTGGGCG ATCGCGGTGT TGGCGGGTCG TGAGCGGCCG AGCGAGGTGA CGGCTGCGGA TCTTGATGAG GTGGCGGGCC GGATCACGGC GGATGTCGTA CGCGCTGCCG TCGCTGGGAA GGACTACACA GCGTACGACT GGTGGAAAGT CCTGTTCGCG ATGTTCCCGA ACTCGGAGCC GACCCATGCC GGCCGTCCCC GGGATCGGGA GGCCCTGATC GGCACGGTCG CTCGCTTCTT CCTCCCCGAC CTTGAAGGCG AGTCTGCGCG GCCGTGCTGT TTCTGCGGGG CCGCCGCGAG TGTCCTGTGG TCGAAGAAGA TGCTTCCATT GTTTGATTCG ACGAAGGCCG TGAATACATT GCCGCCGGCG ACGGCTGGGT GGCCGGTCTG CCGGGGCTGC CGGATCGCCT GGTGGGCTAT GCCGTACGGC GCGAATGTCA CTGCGGGTTC GGCGACGGTG CTCTCCTGTG ACGAGGAGGC GGTTGAACGG GCTTTCGCCG CCGCGGGATG TGTGCGGACG GCCCGTGTGC GCTCGGTCGG TTTCTCCTCG TTGTCCGCGG ATGCGTCACC GGAGGCGGTC ACCCTCTGGG TGCTACGTGA TCATGCTTCG AGTAGTCGGC CGGTGGCGGC GACGCTGTGG AGTTTCAAGA ACGACAATCA GGAGCCCTGG CTGCGGGTGA GTGAGACCCG GATCGCGGTG GTGGGTTTCC TGCGTGCCCT GCCGGCTGAT CCCGAGGCGC ACCGCGGCTG GCGCACCCTG CAGCGTCAGT GCAACAGGGT GGATAGGAAA GGCACGGTGG TCCGACTCGG GCGCGACGTC GTCGCTCGCG CCCTGTTCGA CTCCGTCAAT TTTCCGCCGG ACCAGCTGTG CCGGGAGCTG TCCCATCAGG TCGACGATCT CGGCCGCGTG TCGGCGTCGA CGATTCGCGC CTGGCGAGCG CTGTACGCGC TGTATCTGAA GGAGATGTAC GGGATGGACC GCAAAGCCCT TGAACCGGTG ACGACGCTGC TGGTCGACTG GATCGGGGCG GAGAAGAATC CCCGGGGACG TTTCAACGAG TACCGGAAGG TCGCGGGACG CGGTTTCGAC CTTCAGGTTC TCCTCATGGG AGCGTGCGCC CGCCTGTATC TGGACGGCCA GAAGCCGCCG GACGTCACGA GGATCACGGA GCATCTGCTG GCGTCCGGGC AGGAGGGGCA CCGGCTGCGC GGGCAGTTGT TCTTCGAGGT GGTCGCGGAG CTGGTCGGAC GCGGCGTGGA GATCGGCGCA CGTACCACCG GGGCGGCGAC CGAGGCGGGG ACGGAAACAG AGGCCGACGG TCCGCTCGTC GGTGTGGATG CCGACGAGGA CGAGGAGGCG TACGTCTGA
|
Protein sequence | MIVLARTRLS PRGGLLSLTE HPLQRAGAWA IAVLAGRERP SEVTAADLDE VAGRITADVV RAAVAGKDYT AYDWWKVLFA MFPNSEPTHA GRPRDREALI GTVARFFLPD LEGESARPCC FCGAAASVLW SKKMLPLFDS TKAVNTLPPA TAGWPVCRGC RIAWWAMPYG ANVTAGSATV LSCDEEAVER AFAAAGCVRT ARVRSVGFSS LSADASPEAV TLWVLRDHAS SSRPVAATLW SFKNDNQEPW LRVSETRIAV VGFLRALPAD PEAHRGWRTL QRQCNRVDRK GTVVRLGRDV VARALFDSVN FPPDQLCREL SHQVDDLGRV SASTIRAWRA LYALYLKEMY GMDRKALEPV TTLLVDWIGA EKNPRGRFNE YRKVAGRGFD LQVLLMGACA RLYLDGQKPP DVTRITEHLL ASGQEGHRLR GQLFFEVVAE LVGRGVEIGA RTTGAATEAG TETEADGPLV GVDADEDEEA YV
|
| |