Gene Franean1_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1378 
Symbol 
ID5669786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1666226 
End bp1667506 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content71% 
IMG OID641240304 
Producthypothetical protein 
Protein accessionYP_001505731 
Protein GI158313223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGCTG AGGCAAGCAC TCGACAGGCT TCCCGTCCGT CCTCGACGGC ACGGTTCGGT 
CGTCTCCCCA TGGTCGCTTC GTGCGCGAGC ACGGATCTGC CAGCGGCGGT GTGGCGGTCG
GACGCACCTC CCGACCGGAA TGGACGACCG CGTGCCGGGG ACGAGCCGGT GCCCATGTCG
GCGGAGGTGG CGGCGAAGCG GCGGATGCGG TCGGCGGCGG ACCAGCGAAT GCGTGCCCTC
GTCGGCGCTA CCGTCACATT GCTCGACATC GACGTGTTCT TTGAGCAGGT GGACTGGGTC
GCCGTCGTAC ATGCCGACGG GAACGGGTTG GGCGGGTTGT TCCAGCGCGC GCCGGAGGTG
CTGGGAGATG CGGCGATGGT CGCCGAGCTG AGCCGTCGGG TGCAGGCGGC AGCAGATGCG
GCACTGCGGG CAGCGACGGC TCAGGTACCA GCCCGGCGGG CGCGAGGTGG TTCCGACAGG
TCCGCGCTGG CTCTCGTCCC GCTGGTGGTC GGCGGTGACG ACCTGACAGT TCTGGTGGAC
GGTTCGGCGG CGATACCGTT CGTCCAGAGC TATCTCGTCG AGTTCGGGAG AGCCACCCGT
AACGACGAGC TGATCCGTCG GGTCAACGAC GGGCGGGGAC TGACGGCCGC GGCCGGCGTG
GCGGTGGTGA AGCCGCATTT CCCGTTCTCC GCCGCCTATG GCTTGGCGGA GGATCTGTGC
CGCAACGCGA AGGGCACTCT GGCGGATCTG CCCGTTGGTG TCCCGGCGCA CGCCGTCGAC
CTGCACGTGC TGTTCGACAG CGTGGTGTCG TCGCTGGAGA CGTTGCGCGG CAGGGTCGAA
CTGGCGACCG CGCCGGGTCT CGACGGTGCG CTGTCGTTGC ACGAGCGGCC GTTTCTGCTC
GCTGCCGCGG ACGACGGCCC GTTGCCGGCC GACACCACAT ATCGCGATCT CGGCACGGTC
CTGCGGCGAG CGGCGGCGGT CGCCGGGTGC GCGAACGGCC GTGGGGACGG CGCGGTCGTC
ACCCGCAGCC AGTTGCACGC CTTGCGTGAG GAGCTGACCG TTGACGTGGG TCGTGCCGAG
CGGCGGTTCG CCGATCTGTG GCGGCGGGCC TCGGAGTCCG GTTCTCCTCA GGACCGCGGG
GTGCTGGCCG AGCTGGCCGG CAGCCGCGGC GATCCGCCCG GTCTGGTCCG CCCCGTCAGC
GTAGATCACC GGCGCTGGTC GACGCCGTTG TTCGACGCAA TGGAGCTGGC CGACCTGACG
GTCGGGGCGA AGACCCGGTG A
 
Protein sequence
MFAEASTRQA SRPSSTARFG RLPMVASCAS TDLPAAVWRS DAPPDRNGRP RAGDEPVPMS 
AEVAAKRRMR SAADQRMRAL VGATVTLLDI DVFFEQVDWV AVVHADGNGL GGLFQRAPEV
LGDAAMVAEL SRRVQAAADA ALRAATAQVP ARRARGGSDR SALALVPLVV GGDDLTVLVD
GSAAIPFVQS YLVEFGRATR NDELIRRVND GRGLTAAAGV AVVKPHFPFS AAYGLAEDLC
RNAKGTLADL PVGVPAHAVD LHVLFDSVVS SLETLRGRVE LATAPGLDGA LSLHERPFLL
AAADDGPLPA DTTYRDLGTV LRRAAAVAGC ANGRGDGAVV TRSQLHALRE ELTVDVGRAE
RRFADLWRRA SESGSPQDRG VLAELAGSRG DPPGLVRPVS VDHRRWSTPL FDAMELADLT
VGAKTR