| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1355 |
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| Symbol | |
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| ID | 5669764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1633885 |
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| End bp | 1638534 |
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| Gene Length | 4650 bp |
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| Protein Length | 1549 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641240282 |
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| Product | TrwC relaxase |
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| Protein accession | YP_001505709 |
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| Protein GI | 158313201 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGCCGTG ACGGAGCCTG CGGGGAAAGG AACGGGGAAC CATCGGCCTC CGAGGGTAAC
GTCGCTGCGC TCGAACATTC CCGAGCTGCC CAGGACCGCA CCGCCTACCA CCAAGACGCC
ACCGTTTCCG AGGATCTCGG GCTCAACGCT CCATTGGAAG AACCCGCAGC CCGTTGCGCG
GGTCAAGCCC GACTGCGGGG GAGCCGGCAG GTGGAGGAGC CACGTGCAGT GATCGTCACG
GTGAAGCTGC TGGGATTGCG AGCCCGCGAC GCCGGAACGG TGGTGAAGGC CGCCCGCCGG
ATCGTCGCCT ATGTCGAAGG TGCCCCCGCC GCCGAGCCGA CGAAAATGCG GGCGGCGTAC
TACGGAGAGA ACGGACAATC GCGGGGGCGC GCTCGTGGTT CTGGCGGGAG CCTGGTCGGC
CTACGCGGTC CGGTGAGTTC CGAGCAGCTG CAGCAGCTGC TGACCGGCCG GCACGCAGCG
ACGGGTAGCC CGTTGCTAAC CGGAACGGGC TCGGCGGGGC GCGTTGACCG AGGAACCGTC
AACCTGCCGG CCGGTCAACG GTGGTTCACC CTGACCGAGG CGGCCCGGAT TGTCGGTGTG
GATGCGTCCT ATCTTCGCCG ACTGGCGCGC CAAAGCTCCG GCGCGGAGAC AGGCGGCCCG
CAACGGCAAC GTGATGCCGA GCCGTCGGAA GATGCGGCAC CGAGCACATC CAGAGAGGAG
CAGCATGATG ACTCCCCAGG AGAGAAAACT GCTGCGCGGT TAGCCGCGGA GCGAGACCCT
GATTCCGGTC GGTGGCGGGT CGCGCGCGAT GAACTGATCC GTTTTGTCGA GCAGCGGGAG
CCGCCCACGG TCGTGATCGG ATTCGATGTT GTCTGTGCCG TACCGAAGAG CCTGAGCCTG
CTGTGGGTCT TCGGGGATGA CGAGCTTCGA CGAGACATCG AAAATTCGAT GAACGCTGCT
GTCGACGCGG TGTTCACCTA CCTGGAGAGG CACGCGGCAC AGGGCATGGT GGGCAGCCGT
AATCATCCGG GTCTCGGCCT GGCCGCGGCT TCCTATCTGC ACGACGTGTC GCGGGCGGAC
GAGGCGCATC TGCACATCCA CAACATCGTC GCGAACGCGG TCGCGATACC AGTCCTCGAT
GAAACCGGTC GGCCGGAGCG GGACCCGGTG GGCGGAGCAC GGGTGGAGTG GCGGGCGCTG
GACAGCGAGC TGTTCCTGGC GCATGCGCGC ACAGCCGGGT TCGTCGGCGC GGCCGTGCTT
CGCCACGAGC TGGCCCGCCG TCGGGGTGTC ACGTGGGCGC CGGTCCGCAA CGGGGTGGCC
GAGCTGGAGG ATTTTCCCAC CGAGCTGCTG GCGGCGTTCT CCACCCGTCA CGGGCAGGTA
CAGGAGGAGC TCGGCCAGCT GGTGGCCCAG GGAATGCTCT CGGACGGGCG GACCGAGGCG
GCAGCCCAGC GGCGGTCCCG GGCCGCGAAG AAGGTGCTGG CCGACGCCGA GGTGCACGCC
GTGCAGGAAC GGCGCCTGAC CGAGGCCGGT TGGCACCCCT CTCAGGTGCG GGATCTCGCC
CGCCGCCGCG ACCGGGTACC GGTACAGCCG ACGGCCGTGG ATCTCGCCGA GCTGGCGGAC
CGGCTGATGG GACCGCAGGG CCTGACAGCG AAGGCGCCGA CGTTCGACCG GCGCGACGTC
TACCGGGAGG TCGCCGCCTG GGCATGCGAC CGGCTCGACG CCCACGCGAT CTCCACCGTC
GTCGACCAGC TCCTGGCCGA TCCGCGGATC GTCCGGTTCG AGCAGCATTC CGCGCGCCGG
CGGCACCGCG GCGAGGAGAC GTTCAGCACT GAGGATCTCC TCGACACCGA GGACAGCCTG
CTCAGCCTGT GCCGACAGGG CCGCGTCGAC CGGGGAGGAC CGCCCCGCAC ACTCATCCCT
CCCGCCGCGG TGGAGGCGGC GTTGTCCGGC GACGGCGACG GCGCCCTCGG TGGAATACCG
GGAGTGCGGC TGAGCGGTGA ACAGCAGGAC CTCGTCCGCA GACTTCTCAC CGACGACGAT
CTGGTCCGGC TGGTGGTCGG CCCTGCCGGA TCAGGCAAGA CGGCGGCGAT GCGGACCGTC
GCGCGGGTGC TGGCCGCGCG GGGCGTCACC GTCCTCGGAG CGGCCCACGG CGGCCGTCAG
GCCGAACAGC TCGCGGCCAC GCTGGAGGTG GAGACCCGGG TGGTCAGCGG GTGGCTCACC
CTGCTTGACC ACACCGAGGA TCCCGCCTCG TACTGGCCGG ACGACACGGT CCTGATCGTG
GACGAGGCGA GTCAGGTCTC CACCCGAGAC GCCGAGCGGT TCCTGCGCTA CGCCACCCGC
ACCGGCACGG TCGTGATCCT CGTGGGCGAT CCGGCGCAGT TGGGGAGCGT CGGCGCGGGC
GGATGGTTCG CGCACCTCGT CACTGAAACG ACGCCCCCGC AGCTCACCGG CACCCACCGC
CAACGCGGAC CCGGGATGGC CGAGGTCCGC GCGGCACTGG CCGGCCTGCG CTCCGCGCTG
CCGGCCGAGG CGATGGCCGC GGTCAGTTCG CTGGCCCGCT CCGGCCACGT CCGCCTGTTC
GACGACCGCG CGGCGCTGCT CAGCACGGCG GTCTCCGACT GGTACACCGA GCGCCGGCAG
GCCGGCCGGG CCACGCCGAT GATGGCCGAG CACCAGCGCG ACGTCGACGC GCTCAACACC
GCGGCCCGTG ACGCACTGAC CGCAGACGGC ACGCTGACCG GTCCCGTTCT CACCGCGGCC
GGCCGCGAGT ACCAGACCGG CGACGAAGTG ATCACCCTCA CGCAGGCCGG CCACACCCTG
ATCCCCGCAG GCCGGCCCCG CGGCGACTAC ATCCGTACCG GAACCATCGG CCGGATCGTC
GCGGTGCGCA TCGACCCGTC CCGGCCGCAG CACCAGTCGG TAACCGTCCG ATTCCCCGGT
AAGGGAACGG TGGACGTCGG CTGGGACTAC CTCACCCACC CGTTCCCCGA CGGCCGGGAC
GGCGGTCTGG GCCACGCCTA CGCGCTCACC GCGCACAAGG CTCAAGGGTC GACGATGTCG
ACGGCGCGGC CGCTCATCGT CGACGACACC TCCCGTCCTG GGCTGTACGT CATGCTGTCG
CGCGCCCAGC AGCGCCTGCA GGCCTATCTG ATCCGCCGCC CCGACCTCGA AGCCGACCTG
GACGACGAGG ACTGGCTCCC CGTTCTGCCG ATCGACAGCG CGGTCGATCG GCTGGCCGAG
CGGCTGCGCA CCTCGCGCGC CGAGCGGCTC GCGGGCGACC TTGACCCCAT CGCTCAGACC
GCCCACCGCC TCGGCAGCTC CCACAGCCTG GCAGAACTCC TCGCGCTCGA CAGCCCCACC
GGCCCGCGGG GCAGCGAGAC CGAACGGCCG GGAGCCACTG TGCTGCGCAG GGCTCAGATC
GCCGCACAGG CCCGGGTCAC CGCTGCGGCT GTGGCGGCTC CGGAGCCGGC TCTGCTCGCC
AGGATCGGCC CGAGACCGGA AGCAGGACCG CACCGGCTGC TGTGGGACAG GGCTGTCAGC
GCGCTCGCCA CCTACCGGGC CGCCCACGCG CCCGCCGCCC CCGCCGACGA CCCGGGCCCA
CGGCCGGAGC CCGGCCACCA GGACACCGGC GCCCAACGCT GGAAACGACT ACGCGGCCAA
GCCACCATGC TGGCCGACGC CTGGGCCACC CGGCTGTCCG CCGGCGCCGC CCGCCGCTTC
GCCACTGGTG AGGAGGCCGT ACCTCGCCGA CGGTCGGTGG CGGGCATCCA CGCGTTGCTG
GACGCCGGCT GGGACGCTCG CGATCTCCTG GCGAAGCTCG GCGAACAGGA GCAGACCACC
GCGCGCACCG GCGCCTCGGT TCTGGACCAT CGGGTCGCCG TCCTCTGCGC GCGGGCCCGG
CTGGACATCG CCGCCTTCCA GCTCCCCGCA CCGCAGACCG CGGCCGAAGC CTGGCACGCG
GCGACCACGC TGCTCGGCTC CGCGGAGTCC AGGTATCTCG CGACCCGACC CACCGCCGAC
CTTGCCGCCG AGGAGCGGCT ACTGGGCCGC GTTCTCCGCA TGACCAGGAA CGACGACGAG
CTCCGCGCGC ATCTCCTCAC CCGCATCCGC CGGATGGAGG CGGACCACTC CGCAGCCATA
CGGCGCCTTG ACCACGACAA CGGACCATCC GGAGTAGCAG CCGCCGAAGG TTCTGGCCCG
TCCGCGCAGA CACCTCCTGC CGTACACCGC CTCCGGCGGG CGCAGGCAGC GCACGAACTA
CGGCTCCGTC GCACCCTGCT CGCCGCCGTC GACGGCGACC CGGCCGCTCA CGAAGTGGCC
GCGCGGCATC AGAACCGCGT CAACGCTGCC CTGGAGCACC AGATTGATGA GGCGCTGCTG
CGCATCGACC AGGAACCGCC GCGCTATCTC ACCGACCTGA TGGGATCCCG GCCCGCCGAC
GCCGCCGGTG CGGCCCGCTG GCGCGAGCGT GCCCGCGCGG TGGAGGACTT CCGGCACCGC
GAGCTCGGCC TAGCCTACGG GGTGCTGGCC GCGCCGTCGG CAAGGACGCC TTCCGCGCGA
GCCCTCGACG TGCCTCCCAA ACAACCTGAG CTGCGCGTCC GCTACCAGGC GCTCCTGTCG
GACCCCCAGC AGCTCGATAT CGATCTCTGA
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| Protein sequence | MCRDGACGER NGEPSASEGN VAALEHSRAA QDRTAYHQDA TVSEDLGLNA PLEEPAARCA
GQARLRGSRQ VEEPRAVIVT VKLLGLRARD AGTVVKAARR IVAYVEGAPA AEPTKMRAAY
YGENGQSRGR ARGSGGSLVG LRGPVSSEQL QQLLTGRHAA TGSPLLTGTG SAGRVDRGTV
NLPAGQRWFT LTEAARIVGV DASYLRRLAR QSSGAETGGP QRQRDAEPSE DAAPSTSREE
QHDDSPGEKT AARLAAERDP DSGRWRVARD ELIRFVEQRE PPTVVIGFDV VCAVPKSLSL
LWVFGDDELR RDIENSMNAA VDAVFTYLER HAAQGMVGSR NHPGLGLAAA SYLHDVSRAD
EAHLHIHNIV ANAVAIPVLD ETGRPERDPV GGARVEWRAL DSELFLAHAR TAGFVGAAVL
RHELARRRGV TWAPVRNGVA ELEDFPTELL AAFSTRHGQV QEELGQLVAQ GMLSDGRTEA
AAQRRSRAAK KVLADAEVHA VQERRLTEAG WHPSQVRDLA RRRDRVPVQP TAVDLAELAD
RLMGPQGLTA KAPTFDRRDV YREVAAWACD RLDAHAISTV VDQLLADPRI VRFEQHSARR
RHRGEETFST EDLLDTEDSL LSLCRQGRVD RGGPPRTLIP PAAVEAALSG DGDGALGGIP
GVRLSGEQQD LVRRLLTDDD LVRLVVGPAG SGKTAAMRTV ARVLAARGVT VLGAAHGGRQ
AEQLAATLEV ETRVVSGWLT LLDHTEDPAS YWPDDTVLIV DEASQVSTRD AERFLRYATR
TGTVVILVGD PAQLGSVGAG GWFAHLVTET TPPQLTGTHR QRGPGMAEVR AALAGLRSAL
PAEAMAAVSS LARSGHVRLF DDRAALLSTA VSDWYTERRQ AGRATPMMAE HQRDVDALNT
AARDALTADG TLTGPVLTAA GREYQTGDEV ITLTQAGHTL IPAGRPRGDY IRTGTIGRIV
AVRIDPSRPQ HQSVTVRFPG KGTVDVGWDY LTHPFPDGRD GGLGHAYALT AHKAQGSTMS
TARPLIVDDT SRPGLYVMLS RAQQRLQAYL IRRPDLEADL DDEDWLPVLP IDSAVDRLAE
RLRTSRAERL AGDLDPIAQT AHRLGSSHSL AELLALDSPT GPRGSETERP GATVLRRAQI
AAQARVTAAA VAAPEPALLA RIGPRPEAGP HRLLWDRAVS ALATYRAAHA PAAPADDPGP
RPEPGHQDTG AQRWKRLRGQ ATMLADAWAT RLSAGAARRF ATGEEAVPRR RSVAGIHALL
DAGWDARDLL AKLGEQEQTT ARTGASVLDH RVAVLCARAR LDIAAFQLPA PQTAAEAWHA
ATTLLGSAES RYLATRPTAD LAAEERLLGR VLRMTRNDDE LRAHLLTRIR RMEADHSAAI
RRLDHDNGPS GVAAAEGSGP SAQTPPAVHR LRRAQAAHEL RLRRTLLAAV DGDPAAHEVA
ARHQNRVNAA LEHQIDEALL RIDQEPPRYL TDLMGSRPAD AAGAARWRER ARAVEDFRHR
ELGLAYGVLA APSARTPSAR ALDVPPKQPE LRVRYQALLS DPQQLDIDL
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