Gene Franean1_1308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1308 
Symbol 
ID5669721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1580588 
End bp1580974 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content67% 
IMG OID641240240 
Productphage integrase family protein 
Protein accessionYP_001505668 
Protein GI158313160 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0654905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGTGC CCGCGTACGT CACGGACGCG CTGAGCGGCC TTGCGGGCTC GCCAGGGCCC 
GACGGCCGCC TGATCCGCGC GGACGGCTCA CCGATCACCC GGCACGCTGC TACCCGCGTG
GTCCGACAGG CCGCTGATGA CGCCGGTCTG CCTGACGCGA CGTTCCACAC CCTGCGGCAC
ACGTTCGCGT CGACCCTCCT TGATCAGGGC GTGCCTGTGA ACGTCGTGGC GGAGTACCTA
GGCGACCGGC CGGAGACGGT GTTGCGGACG TACGCACACA AGATCAAGGG TGCGGACGAC
CGCGCCCGAA AGATCATCGG CGGACTGTTC GACCCCCCTC AAGATCAAGA GGACGGAATG
CGGACCGTTA AGATCGTTGA TCTTTAG
 
Protein sequence
MPVPAYVTDA LSGLAGSPGP DGRLIRADGS PITRHAATRV VRQAADDAGL PDATFHTLRH 
TFASTLLDQG VPVNVVAEYL GDRPETVLRT YAHKIKGADD RARKIIGGLF DPPQDQEDGM
RTVKIVDL