Gene Franean1_1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1281 
Symbol 
ID5669694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1544230 
End bp1545324 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content76% 
IMG OID641240213 
Productamidohydrolase 
Protein accessionYP_001505641 
Protein GI158313133 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.413404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACCA CGCCGACGCT GCGGATCACC GGCCACGTCC TGGTGGGCCC CGACGACGTC 
CGGGATGAGG CCTGGGTGGT CGACGGGCGG GTGAGCTTCT CCGCCCCGAC CGGGGCCGCC
GCACGCGACG TGCGCACCGT GTCAGGGTGG GCGATCCCCG GCCTCGTCGA CGCGCACTGC
CACGTGGGCC TCGTCGCGAC CGGGGCCACC GACGCCGCGA CCGCCGAAGA CCAGATCCGC
ACCGACCGGG ACACCGGCGC CCTCCTGCTG CGCGACGCGG GATCGCCGTC CGACACCCGC
TGGATCGACG ACCGCCCGGA CCTGCCGCGA CTGATCCGCG CCGGCCGGCA CATCGCGCGG
CCCAGGCGCT ACCTGCGCGG CTACGCGGCC GAAGTGGACC CGGGCGACCT CGTCGCCGAG
GTCATCGAGC AGGCCGGCCG CGGCGACGGC TGGGTCAAAC TCGTCGGTGA CTGGATCGAC
CGCTCCGTGG GCGACCTCGC CCCCTGCTGG CCGCCGGACG CGGCCCGCGC CGCGATCGAC
GCCGCACACG CCCACGGCGC CCGGGTGACG GCACACTGTT TCGCCGAGAA CTCCCTCACC
GACCTGGCCC GGGCCGGTAT CGACTGCGTC GAACACGCCA CCGGGCTCAC CGCCGACACC
ATCACGCTGT TCGCCGAGCG CGGCGTCGCG ATCGTCCCGA CCCTGGTGAA CATCGCGACC
TTCGAAGGGA TCGCCGCCGG CGCCGAGGCG AGGTTCCCCA CCTATGCCCG CCACATGCGC
GACCTGCACG CCCGCCGGTA CGACACCGTG GCCGCCGCGC ACGAGGCCGG CATTCCGATC
TACGTCGGCA CGGACGCCGG CGGCTCCCTC CCGCACGGCC TGGTGGCAGA CGAGGTGGCC
GAGCTCGTCG CCGCCGGGCT CCCGCCGCGG ACGGCCCTCG GTGCCGCCTG CTGGGACGCC
CGCCGTTGGC TCGGCCGACC CGGCCTGGAG GAGGCCGCGC CCGCCGACCT CGTGGTCTAC
CCCGAGGACC CGACCGCGGA CGTCCGCGTA CTGCGCGCCC CCGACCTCAT CGTCCTGCGC
GGCCGCGCGA TCTAG
 
Protein sequence
MTTTPTLRIT GHVLVGPDDV RDEAWVVDGR VSFSAPTGAA ARDVRTVSGW AIPGLVDAHC 
HVGLVATGAT DAATAEDQIR TDRDTGALLL RDAGSPSDTR WIDDRPDLPR LIRAGRHIAR
PRRYLRGYAA EVDPGDLVAE VIEQAGRGDG WVKLVGDWID RSVGDLAPCW PPDAARAAID
AAHAHGARVT AHCFAENSLT DLARAGIDCV EHATGLTADT ITLFAERGVA IVPTLVNIAT
FEGIAAGAEA RFPTYARHMR DLHARRYDTV AAAHEAGIPI YVGTDAGGSL PHGLVADEVA
ELVAAGLPPR TALGAACWDA RRWLGRPGLE EAAPADLVVY PEDPTADVRV LRAPDLIVLR
GRAI