Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1280 |
Symbol | |
ID | 5669693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 1542776 |
End bp | 1543987 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641240212 |
Product | DNA (cytosine-5-)-methyltransferase |
Protein accession | YP_001505640 |
Protein GI | 158313132 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.138792 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGTGT CGAGGTTTCG GTTGTATCCC GATGCGGTGC AGGAACAGGC CCTGTTGGTG CACTGTGGGC ATGCTCGGTT CGTGTGGAAC CTCGCGTGTG AGCAGCAGTC GTGGTACCGG CCGTGGCGTG GCCGGGCGCC GGGTTATGCG GAGCAGAACC GGCAGTTGAC CGAGGCCCGG TCGGGCAATC CGTGGCTGGC GGCGGGCAGT GTCATCGTGC AGCAGCAGGC TTTGCGTGAC TTCGCGACGG CGATGGCGAA CTTCTTCCGC GGTTCGCATC GCAGGCCCAC TTTCCGTAGG CGTGGGCGTG GTGAGGGGTT CCGGATCGTG GCGGTGAAAC CGGGCGACGT CCGGCGGGTG AATCGCCGGT GGGCGCGGGT GCGTGTCCCG AAGGCGGGCT GGGTGAGGTT CCGCTGGTCC CGTGCTGTGC CGGGCGCGAG GTCGTATCGG GTGACGCGGG ATCGTGCGGG CCGCTGGCAT GTGGCGTTCG CCGTGGCCCC GCATCCGATC CCCGCGCCGG GTACGGGCGG GGTTGTCGGG GTGGACCGTG GGGTGGTCGT GTCGGCGGCA CTGTCGACGG GGGAGCTGCT GTCCTGCCCC GGTCTGCGAG CCGGGGAGCG GGCGCGGCTG GTCCGGTTGC AGCGCCGGCT GTCGAGGGCC AGGCGTGGGT CGCAGCGGCG CGGGCGCCTC AAGGCCCGGA TCGCACGGCT GCGTGCCCGG GAGGTTGACC GGCGCAAGGA CTGGGTCGAG AAGACCAGTA CCGATCTTGC CCGCCGGTTC GACGTGATCC GCGTCGAGGA TCTGAAGATC GGGCAGATGA CCCGCTCTGC GCGGGGCACC GTCGAGGCGC CGGGAAGCAA CGTGCGGCAG AAAGCCGGGT TGAACCGGGG CATTCTGGCT AACGGTTGGG GTCTGCTCGT CGCGCGGTTG GAGGAGAAGG CCCCCGGCCG GGTGGAGAAG GTCCCTGCCG CGTACACGAG TCAGCGTTGC AGTGCCTGCG GGCATGTGGC GTCCGGGAAC CGTGAGAGCC AAGCGGTCTT CTGGTGCGTC GCCTGCGGGT ACACGGCCAA CGCCGACGTG AACGCGGCGG TGAACATCGC GGTTGGGAAC ATCGCGGCCG GACGGGCCGT GACTGCGCGG GGAGGCGCGG CGTTGGCCGT GCCCGTGAAC CGCGAACCTC AACACTGCGC ACCCCTTCTG GTGGGTGTGT AG
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Protein sequence | MAVSRFRLYP DAVQEQALLV HCGHARFVWN LACEQQSWYR PWRGRAPGYA EQNRQLTEAR SGNPWLAAGS VIVQQQALRD FATAMANFFR GSHRRPTFRR RGRGEGFRIV AVKPGDVRRV NRRWARVRVP KAGWVRFRWS RAVPGARSYR VTRDRAGRWH VAFAVAPHPI PAPGTGGVVG VDRGVVVSAA LSTGELLSCP GLRAGERARL VRLQRRLSRA RRGSQRRGRL KARIARLRAR EVDRRKDWVE KTSTDLARRF DVIRVEDLKI GQMTRSARGT VEAPGSNVRQ KAGLNRGILA NGWGLLVARL EEKAPGRVEK VPAAYTSQRC SACGHVASGN RESQAVFWCV ACGYTANADV NAAVNIAVGN IAAGRAVTAR GGAALAVPVN REPQHCAPLL VGV
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