Gene Franean1_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1272 
Symbol 
ID5669685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1530863 
End bp1532866 
Gene Length2004 bp 
Protein Length667 aa 
Translation table11 
GC content73% 
IMG OID641240204 
Productnon-specific protein-tyrosine kinase 
Protein accessionYP_001505632 
Protein GI158313124 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.665559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCT ACCGCTACGG TACGTTGCGT CTGTCGAGTG TCACGGTGAG TGTTCGGGCG 
AGAGTCCGGG AGGGTGGTCG ACGAGTGGAA CTGCGCGACT ACGTGCGCGT CCTGCGTCGA
AGCTGGTTGC TTGTACTGGC CTGCGCCGTA CTGGGAGGTT TGCTCGCGGC TGGCATGAAC
TGGCGTGCGG ACCGGATCTA CGCGGCCACG GTGACCATGG TGGTGTCCTC GTCCGACAAC
GGCGCGAACG CGGCCTTGGC CTATCAGGGC GGCCTGCTCT CCCAGCAGCG GGTGAAGTCC
TACGCCAATC TCGTCGCGAG CGACCGGGTC GCCGAGGCTG TGGTCGACCA GCTGAAGCTC
GGCGACAGCC CGTCCGCGCT GCGCGCGCGC ATCCAGGCGC AGGCCGTTCC GGACACCGTC
CTGTTGCGCG CCGTCGTGCG GGACGCCGAC CCGCGCCGGG CGCAGTCGAT CGCGGACGCG
GTCGGCGAGA CGTTCTCCGA GGCCGTCGCC CGGATCGAGC GGCCGGCCGA GGACGAGCCG
CCGACGGTGC GGGTCAGCGT CTGGGAACAC GCCAAGCTCC CCACCACACC GGTCTCGCCG
CAGCCGGTGC GCAACATCGC GCTCGGCGTG CTGCTCGGCC TGCTGATCAG CATCGGCGCC
GCGTTCCTGC GCCACCGGCT GGACACCAGC ATCTCCAGTG AGGAAGACGC CGCCGGCGTC
ACCGGGCTGC CGAACCTGGC AATGATCAAC TTCGACTCGA GCTCCGGGCG GCAACCGCTG
ATCATCCACT CCGGCCCGTA CACGCAGCGC GCCGAGTCGT TTCGCCAGCT CCGCACCAAC
CTGCAGTTCG TGGACGTCGA CACCGCCCCC CGGTCGATCC TCGTCAGCAG CTCCGTGTCG
CGGGAGGGCA AGACCACCAC GACCTGCAAC CTCGCGATCA CCCTGGCGCA GGGCGGCGCC
CGAGTGTGCC TGGTCGAGGG CGACCTGCGC CGGCCGTCCT TCGGCGAGTA CCTGGGTGTC
GAGTCCGCCG CCGGGCTGAC CTCGGTGCTG ATCGGCGCGG CCGACCTCGA CGACGTGCTC
CAGCCCTGGG GCGAGGGCCG GGTCGGCGAC GGCCGGGTCG AGGTGCTGCC GAGCGGACCG
ATCCCGCCCA ACCCGAGTGA GCTGCTCGGG TCCCGCAACA TGTCCGACCT GATCGAGGTG
CTCTGCTCCC GCTTCGACAT CGTCCTCATC GATGCGCCGC CGCTGCTGCC CGTCACCGAC
GCCGCCGTGC TGTCGACCAG GGTGGACGGC GCCCTGCTGA TCGCCCGGGT CGGCCGGACG
CGGCGCGAGC AGCTGCGCCG GGCCGCGGAT GCCCTGCGGG CGGTCGACGC GCGGATGATC
GGAACGGTTC TCAATATGGT GCCGGCCAAG AGCCAGAACG CCAGCTACTA CGGGCGGTAC
GAGAGCTACG CGCCGCGCGC CCGGCACACG CGCACGACCG GGGCGAACCG GATCCGCATT
CCAGCAGCGC CCGACCGTGG ACTGCGCCCG GCCGGCGGCG GATCCGCGGC CTCGGGCGCC
TCTGTGCCTG CGGCGCCGGT AGCCGGTTCC GCGCAGCTGC CGGCGCAACG AGCGGCGCCG
GCGCCGCTCG TTGCGCCGGC GATGAAGCGA CCGGCCGCTG GGCGGCAGGG CACGCGGCAG
CAGCAGGGCA CCACGGGGCC CGGTTCCAAC TCGCCGGGCG TGGGGCCGGC CGGCGAGGGG
CCAGCAGGCT CGAGACCGGT TGGTCCGGCG GCGGGCTCCG ATCCGTCGGC CGGTGGGTCG
CCGGGCGGGC GTTCGGGTGG CGCGGGCGCG CCGGCCGGGT CTTCGGGATC CGTGGAGTGG
GCAGCTGGTC AGGCCACCGA AGCCGGTGCG GACTCGTCGG CAGTCGAGAT CGCCGCTCAG
CGCGAGCCGG GGGACCACAC CGCGCCGCTC GCCTATGGCG CGGGCACGTC CGACCGCGGT
TCCGACCGTT CGACAGGCCG GTGA
 
Protein sequence
MTGYRYGTLR LSSVTVSVRA RVREGGRRVE LRDYVRVLRR SWLLVLACAV LGGLLAAGMN 
WRADRIYAAT VTMVVSSSDN GANAALAYQG GLLSQQRVKS YANLVASDRV AEAVVDQLKL
GDSPSALRAR IQAQAVPDTV LLRAVVRDAD PRRAQSIADA VGETFSEAVA RIERPAEDEP
PTVRVSVWEH AKLPTTPVSP QPVRNIALGV LLGLLISIGA AFLRHRLDTS ISSEEDAAGV
TGLPNLAMIN FDSSSGRQPL IIHSGPYTQR AESFRQLRTN LQFVDVDTAP RSILVSSSVS
REGKTTTTCN LAITLAQGGA RVCLVEGDLR RPSFGEYLGV ESAAGLTSVL IGAADLDDVL
QPWGEGRVGD GRVEVLPSGP IPPNPSELLG SRNMSDLIEV LCSRFDIVLI DAPPLLPVTD
AAVLSTRVDG ALLIARVGRT RREQLRRAAD ALRAVDARMI GTVLNMVPAK SQNASYYGRY
ESYAPRARHT RTTGANRIRI PAAPDRGLRP AGGGSAASGA SVPAAPVAGS AQLPAQRAAP
APLVAPAMKR PAAGRQGTRQ QQGTTGPGSN SPGVGPAGEG PAGSRPVGPA AGSDPSAGGS
PGGRSGGAGA PAGSSGSVEW AAGQATEAGA DSSAVEIAAQ REPGDHTAPL AYGAGTSDRG
SDRSTGR