| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1267 |
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| Symbol | |
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| ID | 5669680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1525559 |
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| End bp | 1526089 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641240199 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001505627 |
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| Protein GI | 158313119 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.570038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.297351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGC GCGCGCCCGT CACCGCGGTC CTGGCCGTGG TCATCATGAT CGCGCTGCTG
TCCGGATGCA GCCACATCTT CGAACGGCCC TTCGCCGACG TGCCCGCCGA CCTGATCCCC
GTGTTCCAGG CCGCGGCGGC CACCTACGGG GTCCTCAGCG CGGCGCAGCT CGCCGCGCAG
GCCAGGGTGG AGAGCAGCTT CGATCCCGCG GCCGTCTCGC ACGCCGGCGC CCGCGGCATG
ATGCAGTTCC TCCCGACCAC CTGGGCGGAG TTCGGCATCG ACGGCAGCGG CGACGGCCGC
GCCGACCCCC TCGAGCCCCG CGACGCGATC GTCTCGGCGG CCAACTACGA GGCACACCTG
GCCGAGGCCG TGGCCAATCT GCCCGGGGAC CGCATCTCCC TGGTGCTCGC GGCCTACAAC
GCGGGGCCGG ACGCCGTCCG CGCCGCGGGA GGCATCCCGG ACTTCGACGA GACCCGCTCC
TATGTCGCTC GGGTGCATGA CTGGGCCGCC ACCTATCGGG ACCAGCTCTG A
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| Protein sequence | MIRRAPVTAV LAVVIMIALL SGCSHIFERP FADVPADLIP VFQAAAATYG VLSAAQLAAQ
ARVESSFDPA AVSHAGARGM MQFLPTTWAE FGIDGSGDGR ADPLEPRDAI VSAANYEAHL
AEAVANLPGD RISLVLAAYN AGPDAVRAAG GIPDFDETRS YVARVHDWAA TYRDQL
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