Gene Franean1_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1256 
Symbol 
ID5669669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1512377 
End bp1512811 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content72% 
IMG OID641240188 
Producthypothetical protein 
Protein accessionYP_001505616 
Protein GI158313108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000437714 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0306001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCATT ACCGGCGCGG CCGCAAGGTT CCAGCGCTAC CCCCGGTGCG CAGGCACATC 
GTCGGCGGCC TGACCGTGGT GGCCGTGTTC GTGATGGTTG GCCTGACGGT GTGGCGCCCA
CTCGCGGCGC TGCCGGCCCT CGTCGTCATC GCCGCCCTCG GCGTGCTGGA CTACGTGATC
GTCACGACGT CACCGGCCGC GCGGAACCTG CCCTCCGGCC CGCTGAGCGG CCGCGAGCTC
GACTGGGAGT CCGGGCTGAT CGAGGCCGCG TCCGGGCTCG TCGACGCCCC CACCCAGATG
CTGCCGCGCC TCACCTTCGG CTACCCCCGC GACGACGCCG AGGACGTCCC CGAACCAGAC
GCCGAGGACG TCCACACGAT GGCCATCGAC ATGCGCGGCT ACCTGGACGA GACCGGCCCC
GTCCGCATGC ACTAG
 
Protein sequence
MAHYRRGRKV PALPPVRRHI VGGLTVVAVF VMVGLTVWRP LAALPALVVI AALGVLDYVI 
VTTSPAARNL PSGPLSGREL DWESGLIEAA SGLVDAPTQM LPRLTFGYPR DDAEDVPEPD
AEDVHTMAID MRGYLDETGP VRMH