Gene Franean1_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1245 
Symbol 
ID5669658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1498892 
End bp1499233 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content67% 
IMG OID641240177 
Productputative lysyl tRNA synthetase-like protein 
Protein accessionYP_001505605 
Protein GI158313097 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.49301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00622899 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTCAGA AGACCATCGT CTCGTTGATT GACGATCTCA GCGGAGAAGA GGCCGACGAG 
ACGGTCCGGT TCGGACTGGA CGGCGCACAG TATGAGATCG ACCTGTCGGA GAAGAACGCC
ACCAAGTTGC GGGAGTCGTT GGCGCCGTTC GTCACCGCTG CCCGCCGTTC CGGTGGCCGG
GCGGCCAGTG GCCGTCGCGG GGCGCGGGCC GCTTCGCGGC GTACCGGTGG AACCGACCGC
ACCGCCGACA TTCGCGAGTG GGCGCGCAGC AACGGCTACA CGGTGAGTGA CCGGGGCCGT
ATCGCGTCGA ACATCGTGGA GGCGTACGAC AAGGCTCACT GA
 
Protein sequence
MAQKTIVSLI DDLSGEEADE TVRFGLDGAQ YEIDLSEKNA TKLRESLAPF VTAARRSGGR 
AASGRRGARA ASRRTGGTDR TADIREWARS NGYTVSDRGR IASNIVEAYD KAH