| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1238 |
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| Symbol | |
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| ID | 5669651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1485521 |
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| End bp | 1487227 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641240170 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001505598 |
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| Protein GI | 158313090 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00280007 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCCGCAG ACGAAGGACC GAAACACGAC GAACCACGCG ATGGGCGGGA CGGCGGTGCG
GGCCCGAGCG GACCGGGTGG CCCCCCGCGT CGGGTCGGCG AGGGCACCGT GCTGTGGGAG
CCCCCGCCGC GACGGGTTGC CGAGGCCTCG GTGACGAGGT ACCGGGAGTG GCTGGCGGAC
GAACACCAGC TGCGCATCGC CGACTCCACC CGGCTACGGC TGTGGGCCGA GGCCGAACCC
GGCCGGTTCT GGGACTCGAT CTGGGAGTTC TGCGCCGTCG AGGGTGACCG TGGCGACGGG
CCGGCGCTGA CCGGCGCGGC CGTGCCCGAC GCCCGCTGGT TCCCGACGGC CCGGGTCAAC
TACGCGGAGA ACGCGCTCAC CCGGCGCGGC CCGGCCCCGG CGATCATCGC TGTCCGGGAG
GACGGCGCGA CCGCGGTGGT GAGCTGGGAC GAGCTGCGCA GGCAGGTGGC ACGGGCCGCC
GCCGGGCTGC GCCGGCTCGG GGTCAGGCCC GGCGACCGGG TCGGAGCGGT GCTGCCGAAC
ACGGTGCACG CGGTGGTGGC GATGCTGGCG ACGGCGAGCG TCGGGGCGGT GTGGGCGTCG
TGCTCACCGG ATCTCGAACC GGCCGCGCTC GCCGAGCGGT TCATCCAGAT CACCCCGCGG
GTGCTCATCG GCGTCGACGG GTACACCCGC GGCGGCCAGG GCTACGACGC GATCCCGCCG
CTGGCCGACC TGGCCCGGCG CCTACCCAAC CTGGCTGCCA CGGTGCTGGT GCCCTACCTG
TCCGCCGACG CCTACCCGCG GGCGGCGAGC GCAGACCTGC CGGGCCTGCT CACCTGGGAC
GACCTGCTCG CCGCCGAGGC GGAGCCGGCC TTCACCCGGC TGCCGTTCGA CGCGCCGCTG
TGGATCCTGT TCGCCGACGA GATCGCCGGC CCGCCCAGGC CGGTCGTCCA CGGGCACGGC
GGGATCCTGC TGGAACACCT GAAGTCGCTG GTGCTGCACC TCGACCTCGG CCCGGACGAC
CGCTTCTGCT GGTACGGCAC GACCAGCGGC ATGATGTGGA ACTACCAGGT CTCCGGGCTG
CTCACCGGCG CGACGATCGT GCTCTACGAC GGCAGCCCTA GCCACCCGGA CGTGTCCATC
CTGTGGCGGC TCGCCGAGGC GGTGGACGTC ACCTGCCTGG GCGTCTCCGT GGCCCTCGTC
GAGGCCTGCC GGCGGGTCGG GCTGGTGCCA GGCCGCGTCG CGGATCTCTC GCTGTTGCGC
ACGGTCGGGG CGTTCGGGGC CCCGTTCGTC CCCGAGGCCG GTGCCTGGGT CTACGACACG
GTGAGCCCGT CGGTGGCCTT CGTCGCCATG AGCGGCGGCA CGGAGGTCTG CACCGCGCTG
GTCACAGGGC TGCCGACCGA CCCGGTGCGG GCCGGCGAGG CGGGCCGTGC GCTGGGGTGC
GCGGTGGCCG TCGTGGACCC GTCCGGCCGG GAGGTGCCCG GTGGCGGTGC CGGGGAGCTG
GTCGTCACCG CGCCGATGCC GTCGGCGCCC CTGTTCGTGT GGGGCGACCC GACCGGCTCG
TGGCTGCTCC AGAAGCACCT GGCGAGGTTT CCGGGCTGGT GGTGGCAGGG CGAGCGCGCG
CGGATGACGC AGGCCGGCGG GATCGCCGTC GACGGTCCGC TGGACGCCCT CGCCGCGCCC
ACCGGCGCAC GCACCGCCGG CGCATAG
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| Protein sequence | MAADEGPKHD EPRDGRDGGA GPSGPGGPPR RVGEGTVLWE PPPRRVAEAS VTRYREWLAD
EHQLRIADST RLRLWAEAEP GRFWDSIWEF CAVEGDRGDG PALTGAAVPD ARWFPTARVN
YAENALTRRG PAPAIIAVRE DGATAVVSWD ELRRQVARAA AGLRRLGVRP GDRVGAVLPN
TVHAVVAMLA TASVGAVWAS CSPDLEPAAL AERFIQITPR VLIGVDGYTR GGQGYDAIPP
LADLARRLPN LAATVLVPYL SADAYPRAAS ADLPGLLTWD DLLAAEAEPA FTRLPFDAPL
WILFADEIAG PPRPVVHGHG GILLEHLKSL VLHLDLGPDD RFCWYGTTSG MMWNYQVSGL
LTGATIVLYD GSPSHPDVSI LWRLAEAVDV TCLGVSVALV EACRRVGLVP GRVADLSLLR
TVGAFGAPFV PEAGAWVYDT VSPSVAFVAM SGGTEVCTAL VTGLPTDPVR AGEAGRALGC
AVAVVDPSGR EVPGGGAGEL VVTAPMPSAP LFVWGDPTGS WLLQKHLARF PGWWWQGERA
RMTQAGGIAV DGPLDALAAP TGARTAGA
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