Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1232 |
Symbol | |
ID | 5669645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 1474429 |
End bp | 1475181 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641240164 |
Product | LexA repressor |
Protein accession | YP_001505592 |
Protein GI | 158313084 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0475766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0166325 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAGCC AGGAACGGGG TACCCGCCGA GGTGACACCC GTGGCAACGT CCGGGATTTT CCCGACAGCC CCGCGGACGC CTCGGGCCTG ACGCAGCGGC AGAAGAAGGT GCTCGAGGTC ATCCGGTCCG CGGTGGAGCG GCGCGGATAC CCGCCGAGCG TCCGGGAGAT CGGCGAGGCT GTCGGCCTGA CCAGCACCAG CAGCGTGGCA CACCAGCTCA AGGTGCTGCA GGAGAAGGGG TTCCTCCGGC GCGACCCGAA CCGGCCACGG GCGATGGAGG TGCTTCCGAT CGGCGGCGCG AAGACCGGCG GGCGTTCCCG CGCGGGTGCC GCGGCGGCGG CCGGCGCACC CGCCGAGACC ACGGCGCTGG AGGCCGGCAC GCCCACCTAC GTCCCCCTGG TGGGGCGGAT CGCCGCCGGT GGGCCGATCC TCGCGGAGCA GGCGATCGAG GACGTCTACC CGCTGCCGAA GGAGATCGTC GGCGAGGGAA CTCTGTTCCT GCTCAAGGTG GTCGGCCAGT CGATGATCAA TGCCGCCATC TGTGACGGCG ACTTCGTCGT CGTCCGGCAG CAGCCGGTGG CGGACAACGG CGAGATCGTC GCGGCGATGA TCGATGGAGA GGCCACGGTC AAGCGGTTCC GGCAGCGCGA CGGCCGGGTG TGGCTGGCGC CGGAGAACCC GGCCTTCTCC GACATCCCGG CCGAGGACGC GACCATCCTC GGCCGCATCG TGGCGGTGAT GCGCCGGGTC TGA
|
Protein sequence | MTSQERGTRR GDTRGNVRDF PDSPADASGL TQRQKKVLEV IRSAVERRGY PPSVREIGEA VGLTSTSSVA HQLKVLQEKG FLRRDPNRPR AMEVLPIGGA KTGGRSRAGA AAAAGAPAET TALEAGTPTY VPLVGRIAAG GPILAEQAIE DVYPLPKEIV GEGTLFLLKV VGQSMINAAI CDGDFVVVRQ QPVADNGEIV AAMIDGEATV KRFRQRDGRV WLAPENPAFS DIPAEDATIL GRIVAVMRRV
|
| |