| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1228 |
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| Symbol | miaA |
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| ID | 5669641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1469469 |
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| End bp | 1470425 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641240160 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_001505588 |
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| Protein GI | 158313080 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.576413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0402011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCGT CCCGTGACGG CGCCGGCCTG ACCAACGGTG CCACCCGAGC CGATCAGGCC
GGGCCGGTCA TCGCGGTCGT CGGCCCGACC GGCGCCGGTA AGAGCGACCT GGCGGTCGAG
ATCGCCCTCG AGCTCGGTGG GGAGATCGTC AACGCCGACT CGATGCAGCT CTACCGGGGC
ATGGACATCG GCACGGCGAA GATCCCGATG GTCGAGCGCC GCGGCGTGCC CCACCATCTG
CTGGACGTCT GGGAGATCAC CCGCGCCGCG GACGTCGCCA GCTACCAGGC CGACGCCCGG
CGGGTCGTCA ACGGCCTGCT CGCCGCCGGC CGGGTGCCGA TCCTGGTCGG CGGATCTGGC
CTGTACGTGC GGGCGGTTCT GGACGATTTG TCATTTCCCG GCACCGACCC GGCCGTCCGC
GCCCGGCTCG AGCGCGAGCT CGCCGAGGTC GGGCCGGGGC CGCTGCACGA ACGGCTGACG
GGGCTGGCGC CGACCGCCGC CGCGGCGATC CTGCCCGGCA ACGGGCGGCG GATCGTGCGG
GCGCTCGAGG TCGTCGAGCT CACCGGCACA TTCGAGGCCA CTTTGCCCGA ATATCGATCG
ATTTATGACG TCGTTCAGGT CGGCGTGGAC CGCCCGGACC TGGACACGCG GATCGCCGAC
CGGGTGGAGC TGATGTGGCG CGCGGGCTTC GTCGACGAGG TCGCGGCGCT CGCGGAGGCG
GGGCTGCGCG ACGGGCGGAC CGCCTCGCGT GCCCTCGGAT ACGCGCAGGT CCTGGCCGTC
CTCGACGGAG CAATGGACTC CATGGACGCG GCCAAACAGG CCACAACAAC GGCCACCAGG
CGCTTCGCTC GTCGGCAAAG ATCCTGGTTC CGGCGTGATC CGCGGATATC CTGGCTGGAA
TTTCCGGATG TCGCCGCGGC GCTCGCCGAG GTACGACGTC TGGTGGGTTC GCTCTGA
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| Protein sequence | MTASRDGAGL TNGATRADQA GPVIAVVGPT GAGKSDLAVE IALELGGEIV NADSMQLYRG
MDIGTAKIPM VERRGVPHHL LDVWEITRAA DVASYQADAR RVVNGLLAAG RVPILVGGSG
LYVRAVLDDL SFPGTDPAVR ARLERELAEV GPGPLHERLT GLAPTAAAAI LPGNGRRIVR
ALEVVELTGT FEATLPEYRS IYDVVQVGVD RPDLDTRIAD RVELMWRAGF VDEVAALAEA
GLRDGRTASR ALGYAQVLAV LDGAMDSMDA AKQATTTATR RFARRQRSWF RRDPRISWLE
FPDVAAALAE VRRLVGSL
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