Gene Franean1_1227 details

Gene Information

• Locus tag: Franean1_1227
• ID: 5669640
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Frankia sp. EAN1pec
• Kingdom: Bacteria
• Replicon accession: NC_009921
• Strand: +
• Start bp: 1468687
• End bp: 1469472
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 79%
• IMG OID: 641240159
• Product: hypothetical protein
• Protein accession: YP_001505587
• Protein GI: 158313079

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.441921
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.0824427
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGACCCTGG TCGCCGCGGC TGTCTGCCCG CATCCGCCGC TGCTGGTCCC GCAGGTCGCC 
GGGGTGGACC CGGTCGAGGT CCGCGACCAT GCCGGCGCGG CCGTCGCCCG GCTGTGCGCC 
CTCGCCCCGG ACCACATCGT GGTCGTCGGC GACGATGCCG CGGACGCCCA CTACGCCGGG 
TCGGCCGTCG GCTCGCTGGC CGGGTTCGGG GTCGACCTGA GCTTCTCGCT CGGCGCGTCG 
GGCACGGGTC CGGCCGTGCT CCCGCTGTCG CTCACCATCG GAGCCTGGCT GCTGCGTGAG 
GCGGGCTGGG CCGGGCGGTG CTCGGCCCGC GGGGTGCCGG CGGCGACCGG GCCGGCGGCG 
GCCGCGGCGA TCGGCGCCGA CCTCGTGGCC ACCGCGGAGG CGGACGGGTC CCGGCTCGCC 
CTGCTGATCA TGGGCGACGG GAGCGCCCGG CGGACGGTGA AGGCCCCCGG CAGCCTGGAC 
CCGCGGGCCG CCGCGCACGA CGCCTCGGTC TCCGCCGCGC TCGCCACGCT GGACGTCACG 
GCGCTGCTCG CCCTCGATCC CGCGCTCGCG GCCGACCTAC TGGCGCCGGG CCGGGCGTCC 
TGGCAGGTCC TCGCCGGCGC GCTGCGCCGC GCGACGTCGG GCGACCCGGC CCGCTCCTGG 
ACGAGCCTGG TCCGCTACGA CGACGCCCCG TTCGGGGTCG GCTACCTGGT CGTCGGATGG 
GAGCGCGCGG ACGGCACCCG GGTCGACCGG CAGGAGAAGC GGGCCACCGC GCAGAGCGGC 
CGGTGA 

 

Protein sequence

MTLVAAAVCP HPPLLVPQVA GVDPVEVRDH AGAAVARLCA LAPDHIVVVG DDAADAHYAG 
SAVGSLAGFG VDLSFSLGAS GTGPAVLPLS LTIGAWLLRE AGWAGRCSAR GVPAATGPAA 
AAAIGADLVA TAEADGSRLA LLIMGDGSAR RTVKAPGSLD PRAAAHDASV SAALATLDVT 
ALLALDPALA ADLLAPGRAS WQVLAGALRR ATSGDPARSW TSLVRYDDAP FGVGYLVVGW 
ERADGTRVDR QEKRATAQSG R