| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1226 |
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| Symbol | |
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| ID | 5669639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1467206 |
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| End bp | 1468690 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641240158 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_001505586 |
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| Protein GI | 158313078 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.440176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0829042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGCC GTAGCTATCA GGTCCGGACG TTCGGCTGTC AGATGAACGT GCACGACTCC
GAACGGCTCG CCGGCCTTCT CGAGTCCGCC GGCTACGTTC CGGCCCCGGA GGGGTCCGAC
GCCGACGTCG TCGTGTTCAA CACCTGCGCT GTCCGTGAGA ACGCCGACAA CCGGTTGTAC
GGAAACCTCG GTCATCTGTA CCCGGCGAAG AAGAGCAACC CGGCGATGCA GATCGCGGTG
GGTGGCTGCC TCGCGCAGAA GGACCGGTCG GTGATCCTGG ATCGCGCGCC CTGGGTCGAC
GTCGTGTTCG GCACCCACAA CATCCATCGG CTGCCGGTGC TGCTCGAGCG GGCCCGGCAC
AACTCCGCCG CCCAGGTGGA GATCGCCGAG GCGCTCGAGG TCTTCCCGAG CAGCCTGCCG
GCCCGCCGGG CCAGCCATCA CTCGGCGTGG GTCAGCATCA GTGTGGGCTG CGACAACACC
TGCACCTTCT GCATCGTGCC GAGCCTGCGC GGCGGTGAGC GCGACCGGCG TCCCGGCGAC
GTGCTCGCCG AGGTGGAGGC GCTGGTCGCC GAGGGCGCGC TGGAGATAAC GCTGCTCGGC
CAGAACGTGA ACTCCTACGG GCGCTCACTG GGTGACCCGG GCGCGTTCGC GAAGCTGCTG
CGCGCGTGCG GGCGGGTCGA GGGGCTGGAG CGGGTCCGTT TCACCTCACC GCATCCGCGT
GATTTCACCG ACGACGTCAT CGAGGCGATG GCGCAGACGC CGAACGTGTG CCCACAGCTG
CACATGCCGC TGCAGTCGGG GTCGGACGTG GTGCTGCGCC GGATGCGGCG CAGCTACCGC
CGGGAGCGTT TCCTCGGCAT CGTCGAGCGG GTCCGCGCGG CCATGCCGGA CGCCGCGATC
ACCACCGACA TCATCGTCGG ATTCCCGGGT GAGACCGAGG CCGACTTCGC CGACACCCTG
GACGTCGTCC GTACCGCGCG TTTCGCCGGG GCGTTCACCT TCAAGTACTC CCCGCGTCCC
GGCACGCCCG CGGCCGAGAT GGACGGCGCG GTCGATCCCG CGGTGGTCTC CGAGCGCTAC
GGGCGGCTCG CGAGCCTGCA GGACGAGATG TCGTGGGCGG AGAACCGGGC GCAGGTCGGG
CGCCGGGTCG AGATCGTCGT GGCAGAGGGG GAGGGGCGCA AGGACTCCGC CACCGGCCGC
CTCTCCGGAC GCGCCCGCGA CGGCCGCCTC GTCCACCTGC TGGTGACCGG GCCGCATGCG
CAGGAGGGGC TCGTCCGGCC GGGTGACGTC GTGGAGACCG TGGTGACCAG GGGCGCGCCG
CACCACCTGA CGGCGGACGG CCCGCTGCTC ACCCACCGCC GGACCCGCGC CGGTGATGCC
TGGGCCGCCG GCCGCGCCAT CGCCGGCGAC ACCCCGCGCC CGGACCGCCC CGCGGTCTCT
CTGGGGATGC CGCAGCTGCG CCCGAGCGCC CCCGCCGCGC GGTGA
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| Protein sequence | MSGRSYQVRT FGCQMNVHDS ERLAGLLESA GYVPAPEGSD ADVVVFNTCA VRENADNRLY
GNLGHLYPAK KSNPAMQIAV GGCLAQKDRS VILDRAPWVD VVFGTHNIHR LPVLLERARH
NSAAQVEIAE ALEVFPSSLP ARRASHHSAW VSISVGCDNT CTFCIVPSLR GGERDRRPGD
VLAEVEALVA EGALEITLLG QNVNSYGRSL GDPGAFAKLL RACGRVEGLE RVRFTSPHPR
DFTDDVIEAM AQTPNVCPQL HMPLQSGSDV VLRRMRRSYR RERFLGIVER VRAAMPDAAI
TTDIIVGFPG ETEADFADTL DVVRTARFAG AFTFKYSPRP GTPAAEMDGA VDPAVVSERY
GRLASLQDEM SWAENRAQVG RRVEIVVAEG EGRKDSATGR LSGRARDGRL VHLLVTGPHA
QEGLVRPGDV VETVVTRGAP HHLTADGPLL THRRTRAGDA WAAGRAIAGD TPRPDRPAVS
LGMPQLRPSA PAAR
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