| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1222 |
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| Symbol | |
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| ID | 5669635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1463079 |
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| End bp | 1463951 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641240154 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001505582 |
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| Protein GI | 158313074 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.312704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.133993 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCG TGCTGTCGGA TCCCCCCGGC CCGCGTGGCC GGCGTCGCAT CCTGATCGCG
AGCGTGGTCG CGGTGGCCGC GCTGGCGGCG CTCGTCGTCC TCGCCGTGCT GCGCCTGTCG
GACAAGGGCC AGCTCGACGG CGAGGTGTGG AGCGTCTTCT TCGACGAACC CGACCTGCGG
ACGCTGCTGT GGGAGGGCCT GCTCGACACG CTGCGCGCCG CCGCGACCGG CATGGTGCTT
GCCGTCGCCG TCGGAACGGC GCTCGCGTTC GCGCGCCAGT CGAACCGCAG GCTGGTCAGC
ATCCCGGCCA CGGCGGTCGT GGAGATGCTG CGCGGCCTGC CGCTGCTGAT GCTGATCTTC
TTCGCCTACC TTGGCCTGCC GCAGCTCGGC ATCAACCTCT CGGCGTTCTG GGCGCTCGTG
ATCGGCCTGA CCGCCTACAA CGGGGCGGTG CTCAGCGAGA TCTTCCGCGC GGGCATCCAG
TCCATCGACA AGGGCCAGAC GGAGGCCGCG GCGGCGCTCG GGCTGCGCGG CACCCAGATC
TTCACCCTGA TCCAGTTCCC GCAGGCCGTG CGCCGGATGA GCCCGACACT GGTCAGCCAG
CTCGTCACGC TGCTGAAGGA CACCTCGCTG GGCTTCGTCA TCGGATACAC CGAGCTGCTG
CGGCAGGGCC GGTCAGCGGT CGAGTTCCTG GGCGGCCGCT ACGCCCTGCC CGTGTACACC
GTCCTGGCCG TCATGTACAT CATCGTGAAT TTCTCGCTGT CGCTGACCGC GCGCTGGCTC
GAGCGGCGCC AGGCCCGCCG CCTCGGCAGC TCCGCGCCCA TCCTGCTGGA CGCCGCCGAC
ACCGCCGGCC CCGTCGCGGC CGGCAGGAGC TGA
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| Protein sequence | MSIVLSDPPG PRGRRRILIA SVVAVAALAA LVVLAVLRLS DKGQLDGEVW SVFFDEPDLR
TLLWEGLLDT LRAAATGMVL AVAVGTALAF ARQSNRRLVS IPATAVVEML RGLPLLMLIF
FAYLGLPQLG INLSAFWALV IGLTAYNGAV LSEIFRAGIQ SIDKGQTEAA AALGLRGTQI
FTLIQFPQAV RRMSPTLVSQ LVTLLKDTSL GFVIGYTELL RQGRSAVEFL GGRYALPVYT
VLAVMYIIVN FSLSLTARWL ERRQARRLGS SAPILLDAAD TAGPVAAGRS
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