| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1221 |
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| Symbol | |
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| ID | 5669634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1461453 |
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| End bp | 1463054 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641240153 |
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| Product | RNA binding metal dependent phosphohydrolase |
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| Protein accession | YP_001505581 |
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| Protein GI | 158313073 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.655673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.159074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGCGG ACCTTCGCCG GGAGGCGCGT GACGTTGAGG AGGAGGTCGA GCGGATCCGG
CGCCGGGCCG AGCAGGACGC CGCGGAGCAG ACGGAGCGGG TACGGCGGGA GGCCGAGCAG
ATCCGCCGGC ACGCGGAGGA GGCCGCCGAG GCGATCCGGG AACGGGCGGT CGCGGACGCG
GAGCTGCGGG CGTCGAGGGC GGAGGCGGCC GCCCGCGACG CGATCCACGC GGAGCGCGAG
CAGATCCGCG CCGAGCTCGA CGAGGATCTG CGCACCCAGC GGACCGAGCT GCGCGGCTGG
GACAGCCGGC TCACCCAGCG CGAGCAGCGG GTCACCGACC AGGCTGCCAG CGTGGAGGAG
CGGCTGCGCC GGCTGGAGAC CCGCGAGGCC GAGCTGGCCG TCCGCGAGGC CGGGCTGGAC
AGCCGTGAGT CCGATCTCGG CGAGCTGGAG GAGGCCCGGC GGCGGGAGCT GGAGCGGGTG
GCGGGCCTGA CGTCCGCGGA GGCCCGCACC GAGCTGGTCA AGGTGGTCGA GGACCAGGCC
AGGCTGGACG CCGCCGTCCG GGTGCGTGAC ATCGAGGCCC GAGCCGAGGA GGAGGCCGAG
GACCGGGCGC GCCGGATCGT CACCCTGGCC ATCCAGCGGG TCGCCTCGGA CCAGACCGCC
GAGTCCGTGG TGTCGGTGCT GCACCTGCCC AGCGACGAGA TGAAGGGCCG CATCATCGGG
CGCGAGGGTC GCAACATCCG CGCGTTCGAG TCCGTGACCG GCGTCAACGT GCTCATCGAC
GACACCCCGG AGGCGGTGCT GCTGAGCTGC TTCGATCCCG TGCGCCGGGA GATGGGGCGG
ATCACGCTGA CGGCGCTGGT GTCCGACGGC CGCATCCACC CGCACCGGAT CGAGGAGGAG
TACGCCCGGG CCGAACGCGA GGTCGCGGCG AAGTGCGTCC GCGCCGGTGA GGACGCCCTG
ATCGACGTCG GCATCGCCGA GATGCATCCC GAACTGATCA ACCTGCTGGG CCGGCTGCGC
TACCGCACCA GCTACGGGCA GAACGTGCTC GCGCACCTCG TCGAGAGCGC CCACCTGGCC
GGGATCATGG CGGCCGAGCT GCGGCTGCCC CCGGCGATCG CGAAGCGCGG CACGCTCCTG
CACGACCTCG GCAAGGCGTT GACGCACGAG GTGGAGGGCT CCCACGCGAT CGTGGGTGCG
GAGATCGCCC GCCGCTACGG CGAGCACGAG GACGTCGTCC ACGCCATCGA GGCGCATCAC
AACGAGGTCG AGCCGCGCTC CATCGGGGCC GTGCTGACCC AGGCCGCGGA CCAGATCTCC
GGCGGGCGCC CCGGGGCACG CCGGGACAGC CTCGAGTCCT ACGTCAAGCG CCTCGAGCGC
ATCGAGCAGA TCGCCGCCGA GCGCCCCGGG GTCGAGAAGG TCTTCGCCAT GCAGGCCGGC
CGCGAGGTGC GGGTGATGGT CGTACCCGAG CTGGTCGACG ACGTGGCCGC CCACCTGCTC
GCCCGGGACG TCGCCAAGCA GATCGAGGAC GAGCTCACCT ACCCGGGCCA GATCCGGGTC
ACCGTGGTCC GCGAGACCCG CGCCGTCGGC ATGGCCCGCT AG
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| Protein sequence | MVADLRREAR DVEEEVERIR RRAEQDAAEQ TERVRREAEQ IRRHAEEAAE AIRERAVADA
ELRASRAEAA ARDAIHAERE QIRAELDEDL RTQRTELRGW DSRLTQREQR VTDQAASVEE
RLRRLETREA ELAVREAGLD SRESDLGELE EARRRELERV AGLTSAEART ELVKVVEDQA
RLDAAVRVRD IEARAEEEAE DRARRIVTLA IQRVASDQTA ESVVSVLHLP SDEMKGRIIG
REGRNIRAFE SVTGVNVLID DTPEAVLLSC FDPVRREMGR ITLTALVSDG RIHPHRIEEE
YARAEREVAA KCVRAGEDAL IDVGIAEMHP ELINLLGRLR YRTSYGQNVL AHLVESAHLA
GIMAAELRLP PAIAKRGTLL HDLGKALTHE VEGSHAIVGA EIARRYGEHE DVVHAIEAHH
NEVEPRSIGA VLTQAADQIS GGRPGARRDS LESYVKRLER IEQIAAERPG VEKVFAMQAG
REVRVMVVPE LVDDVAAHLL ARDVAKQIED ELTYPGQIRV TVVRETRAVG MAR
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