| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1195 |
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| Symbol | thyX |
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| ID | 5669608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1424991 |
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| End bp | 1425815 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641240127 |
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| Product | FAD-dependent thymidylate synthase |
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| Protein accession | YP_001505555 |
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| Protein GI | 158313047 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1351] Predicted alternative thymidylate synthase |
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| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.200813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0356101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGGAGG TCGGAGTGCC TGACGAGATC GACGAGACCG CCGGGCTGGA GCAGCTCGAC
GAGCCGAGCC CCGGCCCCGT GGCGGCCCGG ATGAAGGTCC AGGTCATAGC CCGAACGGAG
TTCCTCCCGC CGGACGACGT CCCGTGGAGC ACCGACGCCG AGGGTGGCCA GGCGCTCGCG
GAGTTCGCCG GTCGCGCCTG CTACCAGAGC TGGAACAAGC CGAACCCGGC GACGGCGACG
AACGCCGGCT ACCTGCGGCA CATCCTCGAC GTCGGCCACC TGTCGGTGCT CGAGCACGGA
ACGGTCTCGC TGTACATCAC CGGTGTCTCC CGGAGCCTGA CCCACGAGCT CGTCCGGCAC
CGGCACTTCT CCTACAGCCA GCTCTCCCAG CGCTACGTCC CCGAGCACGA TGCGGCCGTC
GTCGAGCCCG AGGTGATCGC CTCCGACCCC GAGTTGCACG CCCTGTTCAC CGAGGCGGCC
GCCGCGTCCA TGGACGCGTA CGCGCGGCTG CTGGAGGGTC TCGAGAAGCG GTTCGCCGAC
GTGTCCGCGC CGACCTCGCG CCGCAAGCAG GCTCGTCAGG CGGCCCGTTC GGCGCTGATG
AACGCCACCG AGACCAGGAT CGTCGTCACC GGCAACTACC GCGCCTGGCG GCACTTCATC
GCGATGCGGG CCAGTGAGCA CGCCGACGTC GAGATCCGTG GGCTGGCGAT CGCCGCGCTG
CGCGCCCTGC GGGATGTGGC ACCGAACGTC TTCGCGGACT TCCGGGTGAC CACCCTCGAC
GACGGCACGG AGGTGGCTTC CAGCCCGCTG GTCGGCGAGG GCTGA
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| Protein sequence | MVEVGVPDEI DETAGLEQLD EPSPGPVAAR MKVQVIARTE FLPPDDVPWS TDAEGGQALA
EFAGRACYQS WNKPNPATAT NAGYLRHILD VGHLSVLEHG TVSLYITGVS RSLTHELVRH
RHFSYSQLSQ RYVPEHDAAV VEPEVIASDP ELHALFTEAA AASMDAYARL LEGLEKRFAD
VSAPTSRRKQ ARQAARSALM NATETRIVVT GNYRAWRHFI AMRASEHADV EIRGLAIAAL
RALRDVAPNV FADFRVTTLD DGTEVASSPL VGEG
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