Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1188 |
Symbol | rpsO |
ID | 5669601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1413077 |
End bp | 1413346 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641240120 |
Product | 30S ribosomal protein S15 |
Protein accession | YP_001505548 |
Protein GI | 158313040 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0184] Ribosomal protein S15P/S13E |
TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.328892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGCTCT CTGGCGACGT CAAGCAGAAG ATCATGTCGG ACTACGCCAC GGTCGACCGG GACACCGGCT CGCCCGAGGT ACAGGTCGCG ATGCTGACCC GTCGCATCAG TGACCTGACG GAGCACCTGA AGGTCCACAA GCACGACCAC CACAGCCGGC GCGGGCTGCT CCTGCTCGTC GGGCGCCGCC GGCGGTTGCT GAACTACCTG GCGAAGACGG ACATCAACCG TTACCGCGCA CTGATCGAGC GACTCGGTCT GCGCCGATAG
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Protein sequence | MPLSGDVKQK IMSDYATVDR DTGSPEVQVA MLTRRISDLT EHLKVHKHDH HSRRGLLLLV GRRRRLLNYL AKTDINRYRA LIERLGLRR
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