Gene Franean1_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1187 
Symbol 
ID5669600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1411832 
End bp1412761 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content74% 
IMG OID641240119 
Productbifunctional riboflavin kinase/FMN adenylyltransferase 
Protein accessionYP_001505547 
Protein GI158313039 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0196] FAD synthase 
TIGRFAM ID[TIGR00083] riboflavin kinase/FMN adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.367067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACGTT GGCGCGGAGT GGAGAACATC CCGGACGACT GGCCGGGAGG AATCATCACC 
ATTGGCTTCT TCGACGGCGT CCACCTCGGG CACCGGCGGA TCATCGGCCG GGCGGTGGAG
CTGGCGCGCG AGCGCGGGCA GCAGGCGGCC GTGGTGACGT TCGACCCGCA CCCGGCGGAG
GTCCTGCGCC CCGGCACCCA TCCCGCGCTG CTGACGACCC TGCGGCACAA GGCCGAGCTG
CTCGAGGCCG TCGGCGTCGA CGCGCTGTGC GTCGCCCCGT TCACCCTCGA CTTCAGCCGG
ATGACCGCCG AGGACTTCGT CCACGAGATC GTCGCCGGGC AGCTGCGCGC GACCGGCGTG
GTCGTGGGGG AGAACTTCAC CTACGGCCAC CGCGCCCTGG GGAACGTGGA GACGCTGGCC
CGCGGCGGCC GTTCCGAGGG CTTCACCGTG GAGGGGATCG GCCTCGTCCA CGCGGACGAG
CAGGTGCTCT CCTCGACGGC GATCCGCCGG CGGGTGGCCG ACGGCGACGT CGAGGGCGCC
GCGGCGGCCC TCGGCCGGCC GCACCGGGTC GAGGGCGTGG TGGTGCACGG GGACGCGCGT
GGCCGGCTGA TCGGCTACCC GACGGCGAAC CTGCAGTGCA CGCCGTGGGC GGCGGTTCCC
GGCGACGGGG TGTACGCGGG CTTCGCGCGG TGGTCCGGCC AGCGGCGGGC GGCCGCGATC
TCGATCGGCA CCAACCCGAC CTTCGAGGGC CGCGACCGCC GGGTCGAGGC GTTCCTGCTC
GACTTCGACG GCGACCTCTA CGGCGAGTAC ATGGTCTACG AGTTCACCCA CCGGCTGCGC
CCGACGCTGC GCTTCGACTC GGTCGACGAG CTCGTCCTGC AGATGGCGCG GGACGTCGAC
GCCACCCGCG CGGCCACGCT CCCCGTCTGA
 
Protein sequence
MRRWRGVENI PDDWPGGIIT IGFFDGVHLG HRRIIGRAVE LARERGQQAA VVTFDPHPAE 
VLRPGTHPAL LTTLRHKAEL LEAVGVDALC VAPFTLDFSR MTAEDFVHEI VAGQLRATGV
VVGENFTYGH RALGNVETLA RGGRSEGFTV EGIGLVHADE QVLSSTAIRR RVADGDVEGA
AAALGRPHRV EGVVVHGDAR GRLIGYPTAN LQCTPWAAVP GDGVYAGFAR WSGQRRAAAI
SIGTNPTFEG RDRRVEAFLL DFDGDLYGEY MVYEFTHRLR PTLRFDSVDE LVLQMARDVD
ATRAATLPV