Gene Franean1_1185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1185 
Symbol 
ID5669598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1409609 
End bp1410703 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content73% 
IMG OID641240117 
Productphosphoesterase domain-containing protein 
Protein accessionYP_001505545 
Protein GI158313037 
COG category[R] General function prediction only 
COG ID[COG0618] Exopolyphosphatase-related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.991694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.383627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCA TGTCCACGGG TACGGAGTCC GACGGTCGCC CGGCTTCAGT CGGAGGGTCG 
GGCGGCGCCT CGGCGCCCAC CGCGGTCCAG CTCGCGTCGC GGCACGCCGC CGAGAGCCTG
GCCGAGGCGG TGCGGGCGCT GCGCGGCGCG GTCGACTCGG GCGGGGGGAT CCTCCTGCTC
GCGCACGTCA ACCCGGACGG CGACAGCCTC GGGTCGGCGA TCGCGCTCGG GCTGGCGCTG
CGCCGCCTCG GCGCGTCCCC GCGGGTCTCG TTCGATGCCG ACCCGTTCGT CGTGCCCCGG
ACTCTGCGCT TCCTGCCGGG CCAGGACCTG CTCGTCGCGC CCGGTGACCT CGGCGACAGC
CCGGAGCTGG TGGTGACCCT GGACGCGGGC AGCGAGGAGC GCCTGGGCTG CCTGGCCCGC
CGACTCGCGG TGCCGCGCTG CATCGTCGTC GACCACCACG CCTCGAACAC CCTGTTCGGC
GACATCAACG TCGTCGACAT CGAAGCGGCG TCCACCAGCG TCATGGTGGT GCGCATCATC
GACGCGCTCG GTGTCGAGCT CGACCAGGAC ATCGCCGCCG CGGTCTACAC CGGGCTGGTC
ACCGACACCG GCTCGTTCCG GTTCGCTGCC ACGACACCGG CCGTCCACGA GCTGGCCGCC
CGCCTGCTGG CGACCGGCAT CCGGCACGAC CTGATCGGCC GGACCCTGTG GGACACGCAC
CGTTTCGGCT ACCTCAAGCT GCTCGGGCAG GCGCTGGAAC GCGCCCGCCT CGAACCCGAG
TTCGACCTCA TCTGGACCTG GTGCACCGAG GCCGACCTGC GGGTGGCGGG CATCGGCTAC
GACGAGATCG AGGCGGTCAT CGACACCGTC CGCACGGTGT CCGAGGCCGA GGTCGCCGTC
GTCTGCAAGC AGGACGGCGA CGTCTGGAAG ATGTCGGTCC GCTCCAAGGG GGCGGTGGAC
GTCGGAGCGG TCTGCACCGC GCTCGGTGGC GGCGGGCACC GCTTCGCGGC CGGCATCTCG
TCGTCGGCGC CGCTGGAGAC CGTGATGCGT GTCTTCCGCG AGGAGCTCAC CCGCGCTCCC
CGCCTCGCCG GGTGA
 
Protein sequence
MTVMSTGTES DGRPASVGGS GGASAPTAVQ LASRHAAESL AEAVRALRGA VDSGGGILLL 
AHVNPDGDSL GSAIALGLAL RRLGASPRVS FDADPFVVPR TLRFLPGQDL LVAPGDLGDS
PELVVTLDAG SEERLGCLAR RLAVPRCIVV DHHASNTLFG DINVVDIEAA STSVMVVRII
DALGVELDQD IAAAVYTGLV TDTGSFRFAA TTPAVHELAA RLLATGIRHD LIGRTLWDTH
RFGYLKLLGQ ALERARLEPE FDLIWTWCTE ADLRVAGIGY DEIEAVIDTV RTVSEAEVAV
VCKQDGDVWK MSVRSKGAVD VGAVCTALGG GGHRFAAGIS SSAPLETVMR VFREELTRAP
RLAG