Gene Franean1_1184 details

Gene Information

• Locus tag: Franean1_1184
• Symbol: rbfA
• ID: 5669597
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Frankia sp. EAN1pec
• Kingdom: Bacteria
• Replicon accession: NC_009921
• Strand: +
• Start bp: 1409043
• End bp: 1409612
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 641240116
• Product: ribosome-binding factor A
• Protein accession: YP_001505544
• Protein GI: 158313036
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0858] Ribosome-binding factor A
• TIGRFAM ID: [TIGR00082] ribosome-binding factor A

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 0.352255
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGCTGATC CGGCTCGTGC GCGCCGGTTG GCGGTGCGGA TCCGTGAGGT CGTCGCGTCC 
ACGCTGGAAC GCGGTGTGAA GGACCCCCGG CTGGGGATGG TGACGATCAC CGACGCGCGG 
GTCACCCCGG ACCTGATGGA CGCGACGGTC TTCTACACGG TCTACGGCGA CGACGTGGCA 
CGGCAGGCGT CCGCCGCCGC GCTGGAGTCC GCCAAGGGCA TGCTGCGCAG CCAGGTGGGC 
CGGGCGACCG GGATCAAGGT CACCCCGACG TTGACGTTCG TGCACGACCG GCTGCCGGAC 
GACGCGCGGC ACCTGGAGGA CCTGCTCGAC GTCGCTCGCC GGCGCGACGA GGAGCTCGCC 
CGGGTGCGCC AGGACGCGAC GCCCGCCGGC GAGCCCGATC CCTACCGGCG CCCCCGGGAC 
GCCGACGAGC TCGACGGCGA CCCGCTCGAC GCCCTGGCGG ATGCCGGGCC CGGCGACGGT 
CTCACTGACG GATTCGGTGA CGGGTTCGGC GGTGACGGAC CGCAGGCCGG TGGGGACACC 
ACAGTCGCCC GGCAGGAGTC GGCGTCATGA 

 

Protein sequence

MADPARARRL AVRIREVVAS TLERGVKDPR LGMVTITDAR VTPDLMDATV FYTVYGDDVA 
RQASAAALES AKGMLRSQVG RATGIKVTPT LTFVHDRLPD DARHLEDLLD VARRRDEELA 
RVRQDATPAG EPDPYRRPRD ADELDGDPLD ALADAGPGDG LTDGFGDGFG GDGPQAGGDT 
TVARQESAS