Gene Franean1_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1183 
Symbol 
ID5669596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1408432 
End bp1408761 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content70% 
IMG OID641240115 
Producthypothetical protein 
Protein accessionYP_001505543 
Protein GI158313035 
COG category[S] Function unknown 
COG ID[COG1550] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.475704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.208027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGATCG GGAGCCTGAC GCTGGACATC CTCCTCGGGG ATATCCATTC CCTGAAGGAG 
AAGCGGTCGG TCGTCCGGCC GGTGGTCGCC GAGCTGCGCC GGCGGTTCGC GGTCAGCGCC
GCGGAGACCG GCGGCCTGGA CCTGCACCGC CGCGTGGAGA TCGGGGTCGC GGTGGTCGCC
GCGGACCGCG CGCACTGCGC GGCGGTCCTC GGCGCGTGCG AGGAGCTCGT CGCACGGCGG
CCGGAGTTGG AGATCCTCTC GGCGCGAGTA CGGTACCTCT CCGAGGACGA CGCCGACGAC
ATGACCCATC CTGAGGTGAT TTTGCCGTAA
 
Protein sequence
MWIGSLTLDI LLGDIHSLKE KRSVVRPVVA ELRRRFAVSA AETGGLDLHR RVEIGVAVVA 
ADRAHCAAVL GACEELVARR PELEILSARV RYLSEDDADD MTHPEVILP