| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1182 |
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| Symbol | infB |
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| ID | 5669595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1405214 |
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| End bp | 1408354 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641240114 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_001505542 |
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| Protein GI | 158313034 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.195294 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGGAA AGGCCCGCGT ACATGAGCTC GCGAAGGAGC TCGGCGTCGA CAGCAAGACC
GTGCTCGCCA AGCTCAAGGA TCTCGGTGAG TTCGTGAAGT CCGCCTCGTC CACAGTCGAG
GCACCCGTGG TTCGGAAACT GAAGGAGGCC TTCCCCGCGG AAGGCTCCGC TCCGTCCTCG
CGTCCCGGCG GTCGTCCGGG CAACGGCGCA CGACCGATGC CGCCGCCCCG TCCGGGGCCC
GCCATCGGCC GTCCCGGCCC AGGTTCCGGC ACCGGTCCCC GGCCCGGCCC TGGTGGCCGT
CCGGTTCCCG GTCGCCCCGG TCCGGCCCCG CTGCCCGGGG CATCGCGCCC GTCCACCCCG
ACGGCCGCGC CCCAGTCCCA GCCGGCTCAG ACCCAGCCGC CCCAGTCCCA GCCGGTGGCG
CCGCAGCCGT CGCAGGCTCC GCGCCCCGCC GCGGCCGCGG CATCCGCCGC GGCGCCGGCC
CCGGCACCCT CGGCTCCCGC CCCGGCACCC TCGGCTCCCG CCCCGGCTCC GATCACCTCG
GCCCCGACGG CCGCCACGCC GCCGGCCGCA CCGCAGCGGC CGACTCCCGG TGGCCCGCGC
CCGGGTCCCG CCGCGCCGGG TCGTCCGCGT ACCGGCGGCC CCGGTGGTCC TGGTGGCCCC
GGCGGCGGCC CGCGTCCCGG GCCCCGGCCC GGCCCGCGGC CGGCCGCGCC CGGTAACAAC
CCCTACACCT CCCCGGCGGC CGGCCCGCGT GCCGCGTCCG GTCAGGGTGG TTCCCCCTCG
GCACCGCCGC GTCCCGGCGC GCCGCGTCCG GGCGGTCCGC GTCCGGGCGG TCCGCGTCCG
GGTGGGCCCG GTGGCCAGCG TCCGTCGCCG GGGCAGATGC CCCCGCGTCC GGGCGGCTCC
GGCGGTCCCC GGCCGACCCC GGGCCAGATG CCCCCGCGTC CGGGCGGCTC CGGTGGCCCG
CGGCCGAACT CGAACATGTT CCAGCCCCGT CCGGCGGGTG GCGCCCCGGG CCGCCCCGGT
GGCGGTGGCG GCCCCGGCCG TCCCGGTGGC GGTGGCGGTG GCCCGCGTCC CGGTGGCGGT
GGGTTCGCTC CCCGTGGGGG AGCCCCCGGC CGTCCCGGTG GCGGCGGTGG CGCTCCGGGT
CGTCCCGGTG GCGGCGGTCC CGGTGGCGGC GGTCGTCCGG CCGCCGGTGG CCGTGGTCGC
GGCGGGACGA CGGCGGGTGC CTTCGGTCCT GGTGGCCGTG GGCGTCCCGG CCGGCAGCGC
AAGTCCAAGC GCGCGAAGCG GCAGGAATGG GAGAGCGGGC TCGAGGCGCC GCGCATGGGG
GCGATGGTCC CGCGCGGTAA CGGGCAGGCG ATCCGGCTGC CGCGTGGCGC GTCGCTCGCC
GACTTCGCGG ACAAGATCGA CGCGAACCCC GGTGCCCTCG TCCAGGTGGT CTTCACCCAG
CTCGGCGAGA TGGTCACGGC GACGCAGTCC TGCACGGACG AGACCCTGCA GCTGCTCGGT
GTGACCCTGG GCTACGAGGT CCAGATCGTC AGCCCCGAGG ACGAGGACAA GGAGCTGCTG
GAGAGCTTCG ACCTGTCCTT CGGCGGCGAC TACGCCGACG ACGTCGAGCT GTCGGCCCGT
CCGCCGGTGG TGACCGTCAT GGGTCACGTC GACCACGGCA AGACGAAGCT GCTCGACGCG
ATCCGGTCCA CGGACGTCGT CGGCGGCGAG GCCGGTGGCA TCACCCAGCA CATCGGCGCC
TACCAGGTTC GTGCGGTCGT GGACGGGACC GAGCGCCCGA TCACCTTCAT CGACACCCCG
GGCCACGAGA CCTTCACCGC GATGCGTGCC CGTGGTGCGC AGGTGACGGA CATCGTGGTC
CTGGTGGTGG CCGCCGACGA CGGTGTGAAG CCGCAGACGA TCGAGGCGCT GAACCACGCG
CAGGCGGCCA ACGTGCCGAT CGTGGTGGCA GTGAACAAGG TCGACAAGGA GGGCGCGGAC
CCGGCGAAGG TCCGCGGCCA GCTCACCGAG TACGGCCTGG TCGCGGAGGA GTACGGCGGC
GACACGATGT TCGTCGACGT CTCGGCCCGC AACCGGACGG GCATCGACGA GCTGACGGAG
GCGGTCATCC TGACCGCCGA CGCCTCGCTC GACCTGCGCG CCCCGACCGG TACCGAGGCT
CAGGGCGTCG CGATCGAAGG TCGTCTCGAC CGCGGTCGCG GCCCGGTGGC CACGGTGCTC
GTCCAGCGTG GCACGCTGCG TATCGGTGAC TCGGTCGTCG CCGGCGAGGC CTTCGGCCGC
GTCCGGGCGA TGCTCGACGA GAACGGCGCC CAGGTGTCCG AGGCGGGGCC GGCGCGGCCG
GTGCAGGTCC TCGGTTTCAC CAGCGTCCCC GACGCCGGCG ACAACTTCCT GGTTGTGCCG
GAGGACCGGG TCGCCCGCCA GATCGCCGAG CGCCGGCAGG CCCGCGAGCG CAACGCCGAG
CTGGCGCTGA GCCGTGGCCG TCCGACGCTC GAGACGATCC TCGAGCGGAT GAAGGAGGGC
GAGAAGACCC AGCTCAACCT CATCCTCAAG GGCGACGTCT CCGGTTCGGT GGAGGCCCTC
GAGGACGCCC TGCTCAAGAT CGACGTGGGC GACGAGGTGG GTCTTCGGAT CATCGACCGC
GGTGTCGGCG CGATCACCGA GACCAACGTC ATGCTGGCGT CGGCCTCCGA CGCGGTCATC
ATCGGCTTCA ACGTCCGGCC GCAGGGCAAG GCGACGGAGC TGGCCGACCG CGAGGGCGTC
GAGGTCCGCT ACTACTCGGT GATCTACCAG GCCATCGAGG ACATCGAGAA CGCTCTCAAG
GGCATGCTCA AGCCGGTGTA CGAGGAGGCG CAGCTCGGCA CCGCCGAGGT GCGCGAGGTC
TTCCGCGTAC CGCGGGTGGG CAACGTCGCC GGTTCGCTGG TCCGGTCCGG CATCATCCGC
CGCAACACCA AGGCCCGCCT CATCCGGGAC GGCGTCGTGG TCGCGGACAA CCTCACCGTC
GAGTCGCTCA AGCGGTTCAA GGACGACGCG ACCGAGGTCC GCGAGGGCTA CGAGTGCGGT
ATCGGGCTCG GCTCGTTCAA CGACATCAAG GTCGATGACG TGATCGAGAC CTTCGAGCAG
CGGGAGGTTC CCCGCACCTG A
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| Protein sequence | MAGKARVHEL AKELGVDSKT VLAKLKDLGE FVKSASSTVE APVVRKLKEA FPAEGSAPSS
RPGGRPGNGA RPMPPPRPGP AIGRPGPGSG TGPRPGPGGR PVPGRPGPAP LPGASRPSTP
TAAPQSQPAQ TQPPQSQPVA PQPSQAPRPA AAAASAAAPA PAPSAPAPAP SAPAPAPITS
APTAATPPAA PQRPTPGGPR PGPAAPGRPR TGGPGGPGGP GGGPRPGPRP GPRPAAPGNN
PYTSPAAGPR AASGQGGSPS APPRPGAPRP GGPRPGGPRP GGPGGQRPSP GQMPPRPGGS
GGPRPTPGQM PPRPGGSGGP RPNSNMFQPR PAGGAPGRPG GGGGPGRPGG GGGGPRPGGG
GFAPRGGAPG RPGGGGGAPG RPGGGGPGGG GRPAAGGRGR GGTTAGAFGP GGRGRPGRQR
KSKRAKRQEW ESGLEAPRMG AMVPRGNGQA IRLPRGASLA DFADKIDANP GALVQVVFTQ
LGEMVTATQS CTDETLQLLG VTLGYEVQIV SPEDEDKELL ESFDLSFGGD YADDVELSAR
PPVVTVMGHV DHGKTKLLDA IRSTDVVGGE AGGITQHIGA YQVRAVVDGT ERPITFIDTP
GHETFTAMRA RGAQVTDIVV LVVAADDGVK PQTIEALNHA QAANVPIVVA VNKVDKEGAD
PAKVRGQLTE YGLVAEEYGG DTMFVDVSAR NRTGIDELTE AVILTADASL DLRAPTGTEA
QGVAIEGRLD RGRGPVATVL VQRGTLRIGD SVVAGEAFGR VRAMLDENGA QVSEAGPARP
VQVLGFTSVP DAGDNFLVVP EDRVARQIAE RRQARERNAE LALSRGRPTL ETILERMKEG
EKTQLNLILK GDVSGSVEAL EDALLKIDVG DEVGLRIIDR GVGAITETNV MLASASDAVI
IGFNVRPQGK ATELADREGV EVRYYSVIYQ AIEDIENALK GMLKPVYEEA QLGTAEVREV
FRVPRVGNVA GSLVRSGIIR RNTKARLIRD GVVVADNLTV ESLKRFKDDA TEVREGYECG
IGLGSFNDIK VDDVIETFEQ REVPRT
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