Gene Franean1_1181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1181 
Symbol 
ID5669594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1404574 
End bp1404981 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content67% 
IMG OID641240113 
Producthypothetical protein 
Protein accessionYP_001505541 
Protein GI158313033 
COG category[K] Transcription 
COG ID[COG2740] Predicted nucleic-acid-binding protein implicated in transcription termination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0245041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.208973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGCC GAGTCGTTTT GCCGGGTCGA TTTGCAGAGT CCAGTCGTCC TGCAGAGCTC 
AGTCGTCCTG CAGACCCGAG TCCTCGAGTG ACCCCCGACC GAGCACCACG TTCGAACGCC
GAGCGGGGTT CTCTCCAGGA CTCTGGACCG ATTCGTACCT GTGTCGGTTG TCGAACCCGG
GCGGCGCGGT CGAGCCTGTT GCGTATCGTC GTAATCGGCG GGGAGCTCCT CCCGGACGTT
CGCCGTCGGA TGCCTGGCCG GGGCGCCCAT GTGCACCCCG ATCTGGCTTG CGTCGATCTC
GCGGAGCGCC GCAAGGCGTT CCCGCGGGCG CTCAGGGTTG CGGGGCCGCT CGGGCTGAAG
CAGGTCAGAG CGCACCTGGA ACAGCGCACG CGCAACATGT GCATGTAG
 
Protein sequence
MQSRVVLPGR FAESSRPAEL SRPADPSPRV TPDRAPRSNA ERGSLQDSGP IRTCVGCRTR 
AARSSLLRIV VIGGELLPDV RRRMPGRGAH VHPDLACVDL AERRKAFPRA LRVAGPLGLK
QVRAHLEQRT RNMCM